Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0426 ATGGAGACTCGCGCCGCAAAGAGGAGGGCGGATGCCGCCGGCTTAGCTCGTAACAAGTCTCCCAAAAGGAAGCGGGTGGTCTTGGGGGAGcttcccaatttctccaatctCACTGATCCTCGAGCTCTGAATAAGAATACGAGGGTCAAGAGGTCTGTGGCGGGAAAAGATAGCCTCCCTTTGGTGGATTCCGAGTTGGATGATGCCAAGCTCAAGGTGAAGAAGGCAGTTGATGATGGTGATGCTAAGCCAGGCATCGATGCTAATTTGGATGATCCACAAAGTAGCGAGCCTTATGTTTCGGACATTTATTCTTATCTGCGCAAAATGGAGATGGATCCAAAGAGAAGACCACTACCTGACTATCTGGAGAAAGTTCAGAAAGATGTTACTGCCAACATGAGAGGAGTATTGGTTGATTGGTTAGTGGAAGTTGCAGAGGAGTACAAGCTTCTATCTGACACCCTTTACCTATCCGTTTCCTACATTGATCGCTTCCTTTCTACTAATCAAGTCGGCAGGCAGAGACTTCAGTTGCTGGGTGTTTCATCCATGTTCATTGCATCGAAGTATGAAGAAATTAGCCCTCCCCATGTGGAAGAATTCTGCTACATCACTGATAATACATACGCAAAGGCAGAGGTTGTAGAAATGGAGGCTGCGATACTCAAGTCCCTTAGGTTTGAAATGGGCAATCCTACTGTAAAGACATTTCTAAGGAGGTTTGTTGGTTTTGCTTCTGATGATAACCTACAGTTCGAGTTTCTTGGCTGTTATCTTGCCGAGCTAAGCTTGTTGGATTACAACTGTATTAAATCCTTACCTTCCCTAGTGGCTGCTTCAGTCATATTTCTTGCCAGATTTATCATCCATCCTAATGTGCATCCCTGGGATTTAGCCCTGCAAAAATGTTCTGGGTATAAATCATCTGAGTTGAAAGAATGTGTGCTCATCATACATGACTTGTATTTGGCAAGAAGAGGAGGGTCCTTGCAAGCTATACGGGAGAAATACAAACAGCACAAGTTCAAATATGTGGCAATGCTGCCTTCTCCTCCAGAGATACCTATTTCTTACTTTGAAGAAGAGTAG 1092 0.4396 METRAAKRRADAAGLARNKSPKRKRVVLGELPNFSNLTDPRALNKNTRVKRSVAGKDSLPLVDSELDDAKLKVKKAVDDGDAKPGIDANLDDPQSSEPYVSDIYSYLRKMEMDPKRRPLPDYLEKVQKDVTANMRGVLVDWLVEVAEEYKLLSDTLYLSVSYIDRFLSTNQVGRQRLQLLGVSSMFIASKYEEISPPHVEEFCYITDNTYAKAEVVEMEAAILKSLRFEMGNPTVKTFLRRFVGFASDDNLQFEFLGCYLAELSLLDYNCIKSLPSLVAASVIFLARFIIHPNVHPWDLALQKCSGYKSSELKECVLIIHDLYLARRGGSLQAIREKYKQHKFKYVAMLPSPPEIPISYFEEE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0426 363 PIRSF Cyclin_A_B_D_E 2 358 IPR039361 -
Sto1g0426 363 SUPERFAMILY Cyclin-like 91 230 IPR036915 -
Sto1g0426 363 ProSitePatterns Cyclins signature. 135 166 IPR006671 -
Sto1g0426 363 CDD CYCLIN 233 320 IPR013763 -
Sto1g0426 363 PANTHER CYCLINS 18 362 IPR039361 -
Sto1g0426 363 Pfam Cyclin, N-terminal domain 102 230 IPR006671 -
Sto1g0426 363 Gene3D - 118 231 - -
Sto1g0426 363 MobiDBLite consensus disorder prediction 1 24 - -
Sto1g0426 363 PANTHER CYCLIN-A3-1-RELATED 18 362 - -
Sto1g0426 363 Gene3D - 102 348 - -
Sto1g0426 363 SUPERFAMILY Cyclin-like 233 354 IPR036915 -
Sto1g0426 363 CDD CYCLIN 134 223 IPR013763 -
Sto1g0426 363 SMART Cyclin_C_2 233 352 IPR004367 -
Sto1g0426 363 Pfam Cyclin, C-terminal domain 233 351 IPR004367 -
Sto1g0426 363 SMART cyclin_7 140 224 IPR013763 -
Sto1g0426 363 SMART cyclin_7 237 321 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0426 Sto-Chr1 3696240 3697929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0426 1 362 Core Cell Cycle Gene Families AT1G47230 56.522 3.20e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0426 K06627 - pvy:116125667 460.685