Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0422 ATGGGGATGACATTGAGATTGAGAAGTAGAAGTAGCTTCAAGAAACGAAATTTCATGGAGTTTTGTGATGGCTTGGAGGAGATTAAGAGTACTGAGGAATCTGAATGTGTAAAGAGAAGGAATGTGGGAATTGTGAAGCTACAAAATTCTCTATTTCCATTCAGATGTTTGATGGGGTGGGAGGCTTCATTCTCTGCTAATATTAAAGGGTGCTCTGTTTCACAAAAGGATAAATCAAAATCAGCACTTTCTAAGTTGGCACGAGCAGCAACAATGGCTGCTAAGGTGGGAAAAGGTTTGTCTAAAGATGATAAAGCGCAGAAATTAGCTCTCAGGCACTGGCTCGAAGTTAAAGAGAGGGAAGCATATGAAGTGAGTATAGACAATAATGGAAGGCTTATTTATAAAGAAAGCAAGAGTGTGGTACACACTCCTGAGGGATCAAAGTGGATATTTGTTCTGAGCTCTTCCAGAATTTTGTATGTTGGTGAAAAGAAGAAAGGCATATTTCATCACTCTAGTTTTCTTGCTGGTGCTGCTACCATTGCTTCTGGAAGATTGGTTGCATTCAATGGAGTCATAGATGCTATATGGCCATATAGTGGTCATTACTGTCCAACAGAGGAGAACTTTAATCAATTCATTGGCTTCTTGGAAGAACATAATGTGGACTTGACAAATGTAAAGAAATATGCAGTGGATGATGATGTGCCTCCTTCAAAACCAGTTACTGAGTGTGATTGCATAGAGGGTGATCATGTGGATCAATTTGGTACCAAAATTAATGTGGAAGTTTCACAAGTGAAAGAGGGGAGGGCATTAATGTCAAGAAAATGGAGTTACAGGGGTCGTCCTGGAAATGAATCAGATAAAATAACTTCATCAGATCCGAACTGTCCTATGATTATTTGTGACACAACGTACCCTAAAAAATTCCAATTTCTAGAGGCACTTGAACACCTTAATCTATCACCAAGGGAGAAGGTTAATATCAGTAATGACAAGAGCAATAAGAAGAAGTGGAGGCTATGGAGAAGCTCTTCAGAAGGTTCTGGATTTGTGAAAAGCACAAAGAAGGGACAGTCACATTATGCAGCATCGGAGATTTCTGATTCATCATCCATTGTGGTGGTGGATGATGCATTTGCTGCAGCAATGGCTACTGTAGTGGTTCGAGCTGCACCTAAAGATTTCATGGCTATCAAGCAGGAAAGGGCTGCCATTCGTATTCAATCTGTGTTCAGAGGTTTCTTGGCTAGACAAGCTTTGAGGGCTCTAAGGGCAGTGGTGAGGCTTCAAGCTATATTTAGAGGGAGGCAAGTGAGAAAGCAAGCAGCTGTAACTCTAAGGTGCATGCAAGCTCTTGTTAGAGTTCAAGCACATGTGAGAGCAAGAAATGTGAGAATGTCTTCTCAAGAAGAGGCTGAGCAGAACTTAATAGATCACCAAGAAGATGATCCTCTTAAGCAGGCTGAGGAAGGATGGTGTGATATTCCTGGAACTGTGGATGAAGTTAAAGCAAAGATACAAATGAGGCAAGAAGCTATGATCAAGAGGGATAGAGCAATGGCTTATTCTCTCTCTGCATTGcaATCAAGACTAAGTGCAAGCCCAAAATCAAAAGCCACAAAGCCAGTGATGAACAAGAGCTTGTTAGATCAATGGATATCAAGCAAGCCACGGGAAAGCAGGTTAATAGAAGGTACCAATTTTGACCCTAGAAAAAGCAGTGAAATTGAACATCTAGAAAGCTTAATTAAAGCAAGAAGGAATGGTATTACAACAAGAATCTCCACTAAACCTCCTCCAACTCAAtcaacttcatcatcatcatcttcttctttagtCCTGAGTGCTGAATCCACCATGTATGATGATAGCCCTGAATCGTCCACTTCATACACTTCCATGCCACATTCTCTTGTGGTGGAGGAAACAAGAGGGGAAAGAAATGGTGTTCAAAAGCCAAGCTATATGAATGTGACAGAGTCAACTAAAGCTAAACAAAGAGCTTATTGCAGCTATTATATGAATGGAGATGGTAGAAGCAATTTTTCTGGTCCTGATCTTTCTGGTAATTTGTGGAGAAGTCAATGTGCTACCCCTCAGAGGTTGAGTTATAAAAGAGAAGCCAAGAGAGACAACAAAAGTGGTGACATAAAAATAGAAGGATTGGTTTGA 2181 0.4003 MGMTLRLRSRSSFKKRNFMEFCDGLEEIKSTEESECVKRRNVGIVKLQNSLFPFRCLMGWEASFSANIKGCSVSQKDKSKSALSKLARAATMAAKVGKGLSKDDKAQKLALRHWLEVKEREAYEVSIDNNGRLIYKESKSVVHTPEGSKWIFVLSSSRILYVGEKKKGIFHHSSFLAGAATIASGRLVAFNGVIDAIWPYSGHYCPTEENFNQFIGFLEEHNVDLTNVKKYAVDDDVPPSKPVTECDCIEGDHVDQFGTKINVEVSQVKEGRALMSRKWSYRGRPGNESDKITSSDPNCPMIICDTTYPKKFQFLEALEHLNLSPREKVNISNDKSNKKKWRLWRSSSEGSGFVKSTKKGQSHYAASEISDSSSIVVVDDAFAAAMATVVVRAAPKDFMAIKQERAAIRIQSVFRGFLARQALRALRAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQAHVRARNVRMSSQEEAEQNLIDHQEDDPLKQAEEGWCDIPGTVDEVKAKIQMRQEAMIKRDRAMAYSLSALQSRLSASPKSKATKPVMNKSLLDQWISSKPRESRLIEGTNFDPRKSSEIEHLESLIKARRNGITTRISTKPPPTQSTSSSSSSSLVLSAESTMYDDSPESSTSYTSMPHSLVVEETRGERNGVQKPSYMNVTESTKAKQRAYCSYYMNGDGRSNFSGPDLSGNLWRSQCATPQRLSYKREAKRDNKSGDIKIEGLV 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0422 726 MobiDBLite consensus disorder prediction 706 726 - -
Sto1g0422 726 ProSiteProfiles IQ motif profile. 427 454 IPR000048 GO:0005515
Sto1g0422 726 ProSiteProfiles IQ motif profile. 403 431 IPR000048 GO:0005515
Sto1g0422 726 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 332 674 - -
Sto1g0422 726 SMART iq_5 402 424 IPR000048 GO:0005515
Sto1g0422 726 SMART iq_5 425 446 IPR000048 GO:0005515
Sto1g0422 726 MobiDBLite consensus disorder prediction 704 726 - -
Sto1g0422 726 Pfam IQ calmodulin-binding motif 404 424 IPR000048 GO:0005515
Sto1g0422 726 Pfam IQ calmodulin-binding motif 427 444 IPR000048 GO:0005515
Sto1g0422 726 Gene3D - 400 452 - -
Sto1g0422 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 445 IPR027417 -
Sto1g0422 726 MobiDBLite consensus disorder prediction 594 637 - -
Sto1g0422 726 PANTHER IQ-DOMAIN 5-RELATED 332 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0422 Sto-Chr1 3629904 3641828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0422 328 670 IQD Protein Family AT1G72670 47.383 9.69e-83 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0422 - - ahf:112710157 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0422 1 3629904 3641828 Sto9g0156 9 1394471 1398278 CCT