Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0413 ATGGAATCCCAGCATGAGGAAGAGCAGCACATAGCAGTATCAAGACTGCTTCACGCTCAAACCCACATATGGAATCACATCTTCAGCTTCATAAACTCCATGTCCCTCAAATCCGCCATTGACCTAAACATCCCTGACATCATTCACAAACACGCCAAACCCATGCCTCTTCCCTTACTCATCTCCTCCCTCCAAATCCACCCTTCTAAATCCCCCAACATCTACCGCCTCATGCGTATCCTCACACATTCTGGCTTCTTCTCTCAATCACAAGAAGGTTATGTCCTAACGGACGCTTCTACCCTTCTTGTCAAGGACAACCCCTTGAGTGTGTACCCTTACTTGCTTGCCATGATGGACCCCGTCCTGATCAAGCCCTGGTTCCACCTGGCCAGCTGGTTCAAGAATGATGACCCGACGCCGTTTTGCACGGGCCACGGGAAGAAGTTTTGGGAGTACACAGGGGATGAGGCGTTGCTGAATCGCTTGTTTAATGAAGCCATGGCGAGTGACGCGAGGCTGGTGTCGAGTGTTGTGATAGGCAAGTTTAAGAGAGTGTTTGAAGGGTTGGAGTGTGTTGTGGATGTTGGTGGTGGGACGGGGAGTATGGCTAAGGTTATAGCTAAAGCGTTTCCGGAAATGAAGTGTACTGTGTTTGATCTCCCACATGTTGTTGAAGGACAACGAGATAGTGGGAACCTTAAGTTTGTTGGAGGAGACATGTTTCAGGATGCTCCTCTTCCTCCAGCCGATGCCATATTGTTGAagTGGATTCTACATGACTGGAACGATGAGGAATGTATGAAGATACTGAAGAAGTGCAAGGAGTCACTTGCAAGCAAAGGGAAAGATGGAAAGTTGATAATAATAGACATTATTATGAAGGAGAATTATGAGAAGGGAGATATGGATGACGAATCaataatggaaactcaactttacTTTGATATGCTGATGATGGTTTTGTTGACTGGAAAAGAGAGAAACGAGAAAGAATGGGCCAAATTGATCTTCTCTGCTGGTTTCAGTGACTACAAGATAACTCCAGTTCTGGGTTTAAGATCTCTCATTGAGTTTGAGCATTTTTCGAGTCTGTATGAAACATGGCCAGAATGA 1116 0.4507 MESQHEEEQHIAVSRLLHAQTHIWNHIFSFINSMSLKSAIDLNIPDIIHKHAKPMPLPLLISSLQIHPSKSPNIYRLMRILTHSGFFSQSQEGYVLTDASTLLVKDNPLSVYPYLLAMMDPVLIKPWFHLASWFKNDDPTPFCTGHGKKFWEYTGDEALLNRLFNEAMASDARLVSSVVIGKFKRVFEGLECVVDVGGGTGSMAKVIAKAFPEMKCTVFDLPHVVEGQRDSGNLKFVGGDMFQDAPLPPADAILLKWILHDWNDEECMKILKKCKESLASKGKDGKLIIIDIIMKENYEKGDMDDESIMETQLYFDMLMMVLLTGKERNEKEWAKLIFSAGFSDYKITPVLGLRSLIEFEHFSSLYETWPE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0413 371 Pfam O-methyltransferase domain 127 343 IPR001077 GO:0008171
Sto1g0413 371 PANTHER O-METHYLTRANSFERASE 12 358 - -
Sto1g0413 371 CDD AdoMet_MTases 193 294 - -
Sto1g0413 371 Gene3D Vaccinia Virus protein VP39 104 360 IPR029063 -
Sto1g0413 371 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Sto1g0413 371 Gene3D - 5 103 IPR036388 -
Sto1g0413 371 Pfam Dimerisation domain 34 82 IPR012967 GO:0046983
Sto1g0413 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 359 IPR029063 -
Sto1g0413 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 361 IPR016461 GO:0008168
Sto1g0413 371 SUPERFAMILY "Winged helix" DNA-binding domain 15 108 IPR036390 -
Sto1g0413 371 PANTHER O-METHYLTRANSFERASE 12 358 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0413 Sto-Chr1 3477426 3482049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0413 34 347 Monolignol Biosynthesis Gene Families AT5G54160 34.545 3.08e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0413 - K16040 gmx:100794122 468.388