Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0412 ATGCCCAAAGGCAAATCATGTGAACCCACAGACTCCATAGATAGCAGCGAGAGAGTGATGGAATCCCAGCACGAGGAAGAGCAGCATATAGCAGCATCAAAACTGCTTGACGCTCAAATCCACCTATGGAACCACGTCTTAAGCTTCATCAACTCCATGTCCCTCAAATCCGCCATTGACCTAAACATCCCCGACATCATTCACAAACACGCCAAACCCATGCCTCTTCCCTCGCTCATCTCCTCCCTCCAAATCCACCCTTCCCAATCCCCCAACATCCACCGCCTCATGCGTATCCTCACGCATTCTGGCTTCTTCTCTCAATCGAAAGAAGGTTACGTCCTAACCCACGCTTCTACCCTCCTTCTCAAGGACAACCCCTTCAGTGTGTCCCCTTTCTTGCTCGCCATGCTGGACCCGGTCCTGATCAAGCCCTGGTTCCACGTGGCAAGTTGGTTCAAGAATGGGGAGGACCCCACCACGACGACGCCGTTTGGGACGGCCCACGGCGGGAAGACGCTGTGGGAGTACGCGCGGGACGAGGCGGAGCTGAATGGGGTGTTTAATGAGGCGATGGCGAGTGACGCGAGGGTGGTGGCGAGTGTGGTGATGGGTAAGTGTAAGAGAGTGTTTGAGGGGTTGGAGTGTCTTGTGGATGTCGGTGGTGGGACGGGGACGGTGGCTAAGGCTATAGCTAAAGCGTTTCCTCAAATGGAGTGTACTGTGTTTGATCTCCCACACGTTGTGGAAGGACAAGAAGATAGTGGGAATCTCAAGTTTGTTGGAGGAGACATGTTCCAGGATGCTCCTCTTCCTCCCGCCGATGCCATATTGTTGAAGTCGATTCTACATGACTGGAACGATGAGGAATGTGTGAAGATACTGAAGAAGTGCAAGGAGTCACTTGCAAGCAAAGGGAAAGATGGAAAGTTGATACTAATAGAAATTATTATGAAGGAGAATTATGAGAAGGGAGATATGGATGACGAATCaataatggaaactcaactttacTTGGATATGCTGATGATGGTTATGTTGACTGGAAAAGAGAGAAACGAGAAAGATGGTTATGTTGACTGGAAAAGAGAGAAACGAGAAAGAATGGGCCAAATTGATATTCTCTGCTGGTTTCAGTCATTACAAAATAACTCCAGGTCTGGGTTTAAGATCTCTCATTGA 1182 0.4865 MPKGKSCEPTDSIDSSERVMESQHEEEQHIAASKLLDAQIHLWNHVLSFINSMSLKSAIDLNIPDIIHKHAKPMPLPSLISSLQIHPSQSPNIHRLMRILTHSGFFSQSKEGYVLTHASTLLLKDNPFSVSPFLLAMLDPVLIKPWFHVASWFKNGEDPTTTTPFGTAHGGKTLWEYARDEAELNGVFNEAMASDARVVASVVMGKCKRVFEGLECLVDVGGGTGTVAKAIAKAFPQMECTVFDLPHVVEGQEDSGNLKFVGGDMFQDAPLPPADAILLKSILHDWNDEECVKILKKCKESLASKGKDGKLILIEIIMKENYEKGDMDDESIMETQLYLDMLMMVMLTGKERNEKDGYVDWKREKRERMGQIDILCWFQSLQNNSRSGFKISH 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0412 393 PIRSF O-mtase 19 362 IPR016461 GO:0008168
Sto1g0412 393 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 385 IPR016461 GO:0008168
Sto1g0412 393 Gene3D - 23 122 IPR036388 -
Sto1g0412 393 Pfam Dimerisation domain 53 101 IPR012967 GO:0046983
Sto1g0412 393 PANTHER O-METHYLTRANSFERASE 30 356 - -
Sto1g0412 393 MobiDBLite consensus disorder prediction 10 26 - -
Sto1g0412 393 SUPERFAMILY "Winged helix" DNA-binding domain 33 127 IPR036390 -
Sto1g0412 393 PANTHER O-METHYLTRANSFERASE 30 356 IPR016461 GO:0008168
Sto1g0412 393 MobiDBLite consensus disorder prediction 1 26 - -
Sto1g0412 393 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 355 IPR029063 -
Sto1g0412 393 Gene3D Vaccinia Virus protein VP39 124 363 IPR029063 -
Sto1g0412 393 CDD AdoMet_MTases 217 314 - -
Sto1g0412 393 Pfam O-methyltransferase domain 146 356 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0412 Sto-Chr1 3465904 3467340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0412 53 356 Monolignol Biosynthesis Gene Families AT5G54160 34.069 2.11e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0412 - K16040 gmx:100781008 410.994