Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0393 atgaagaagatggagatggaAGAGGAGGAGAATGATGAAGGTGAATGCAACAATCCGAACAACCAAGCGTGTGCCGCGTGCAAGTACCGCCGCACCAAGTGCGCCTCCGACTGCCTCCTGGCGCCGTACTTCCCTCACGACCGCCAGCGCCAGTTCCTCAACGCGCACAAGCTCTTCGGCGTCCGCCACATCACCAAGATCATCGAGCACCTCGACCCTCACGATCGCGACCAGGCCATGCGATCCATCATCTACCAGTCCGACATGCGCGCCAACGATCCCGTCGGAGGCTGCTACCGCTACATCCAAGAGCTCCAGGCGCAGATCGACTTCCATCGCGCCGAGCTCGATCTCGTCCTCCAGCAACTCGCGATCTTCCGATCTCATCAATTGAATCTTAATTACAACAACAATTACCATCATcatcagcagcagcagcagcatctTCCTAATTATGTTCCTCATCACGATCAGCAATTGGCGGCGGCGTATATGATGGCGGAAGGCGGAGGTCAGAGTGTTGTGGAGGAGGATGTGAATTCTTCTTGGGCGGCGGTGCCGCAAGATTTATCGTCGGCGATGTCGTCGTTGCATCAGAACAAGATTAATTGTGGCGGCGGTTATAATCTTGTTGGCGATGATCAATTGTACGACGCTCggaatattaataattataatattaataaatcgtcgtcgtcgtcgtgcATGCTGGATGTTCAGTATAATAATGGTGATGCGAGGAATTATGAGCTCGGGTTTGAGGCGGATGAATTAGTGGATCATCATCGCAGTGATGAAAGGGTTTTGTTTAAGATAGACAATGCAATAGTGAAAGCAGAGGCTGCAGATTGCATTCATCAGCAGGTTCAAGATCATGACCTAAAAGGCGCAGCAACTTTGTTTACTCTCACAAATTGTACTAGCTAA 927 0.4639 MKKMEMEEEENDEGECNNPNNQACAACKYRRTKCASDCLLAPYFPHDRQRQFLNAHKLFGVRHITKIIEHLDPHDRDQAMRSIIYQSDMRANDPVGGCYRYIQELQAQIDFHRAELDLVLQQLAIFRSHQLNLNYNNNYHHHQQQQQHLPNYVPHHDQQLAAAYMMAEGGGQSVVEEDVNSSWAAVPQDLSSAMSSLHQNKINCGGGYNLVGDDQLYDARNINNYNINKSSSSSCMLDVQYNNGDARNYELGFEADELVDHHRSDERVLFKIDNAIVKAEAADCIHQQVQDHDLKGAATLFTLTNCTS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0393 308 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 17 230 - -
Sto1g0393 308 Pfam Lateral organ boundaries (LOB) domain 23 118 IPR004883 -
Sto1g0393 308 Coils Coil 102 122 - -
Sto1g0393 308 ProSiteProfiles LOB domain profile. 22 123 IPR004883 -
Sto1g0393 308 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0393 Sto-Chr1 3235908 3240738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0393 22 144 AS2 family AT3G13850 64.800 4.86e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto1g0393 LOB 4.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0393 - - gmx:100786728 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0197 9 1741310 1749078 Sto1g0393 1 3235908 3240738 CCT