Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0391 ATGGCCAATCAAACAACGTGTCCTGCGTGTAACCTGCAGCGCGGAAACTGCGCCCCAAATTGCCCTTCTTCCGCTCTCGTTACCCACCGCCAATTCCTCAACGCTCACAAACAATTCGGCGCTGATAACGTCGCCAAAATCTTGCAACGCTTCCACAATAATCCTATTCCTCCACAGAACGATGAAGCCACGCGATCCTCCACCGTCTTCTACTCCGATTCCGATATGCTTCTCCTCCTCCGTCACCAGATCGTTCGCCTTCAATACGAACTCGATCGCGTCACTCAATCTCTCGCGAATTTCTCGTCTCTCTCCTCTTACGACCAACAACTACTCATCCATCGTCTCAGAGATCAATTAAATCTTTACCTCAACATAAACAACGCCGCCGCCGCCTcctcctccgccgccgccgTGCCGCCGCCGGTCATTTATCAGGAACAACGACGACTCATCTGTAGTATCGTAGATCAATTGAATCTTTACCTCGACAGCAACGCAATCGCCGCCAGCTCCTCCTCCGCCGTACCGCCGCAGATCTGCGAACAACAACTACGCATTCACACCGCCGCCTCCGCCGTACCGCCGCCGGTTCATCATAATCAGCCGTATTATTCGCATAATTTTCTTGATCATAATCAAGAATTGGCGCCGCTGATGCAACCAGAGGCGTATATTATGATTGGAGATCGTCAGATGAATGCTGCGCAAGATGATCTTGCGTATTTGATGAGGTGGCAGTTGCGGAACCAGAATTATGGTGGTGGCGGCGGTGGTGGTTATAATGTTGGTGATGAATTACTGTGCGATCCGAACGATGCgcgtaataataataataataggcgATCGGCGTCGATTGATCAGCTCAGGATTGGGGCGGATGATCAATTAGTGGAGCAGCGCAGCGATGATCAAAGAGTTCAGAATCAGAATCAGAATGAGAATCCTGTAATTCATCAAGATGATAATAAAAAAGAAGGGCTAAGAGTAAAAGATAAGAGAGATTATTTGACAGTTAATCCTCGACAAGAGACGAGAACAGATTGCAAAGCAAAAATATCCCTCGTCCTTCAAGATGGGAAGTTGAGAGTGAAGGAATTTGTAGAAGAGCATAATCATGTACTCCATACTATGCAAACTGCACACATGCTAGCTTCTCAACAGCACGTGTCTGAAATCCAAGCTCATGAAATTGAACCTCTCCCTCCATTTTCACCCAACTTTAACGATCCATTTCCAAATCTTCAACCTAACACCAACCTTGCACTTCGCGTCGGAAGTCGCCGCCGCCGCCAGCTTCTTCCCGGCGGGAGGATTAACCGTAATTCCATCACAAGAAACCCTTATCCCAACCTTAGGTGTCTTCACCGGCCCTCCCATCTTCGCCTTCACCTTCGTTTCCAAAATCACTCTCAACGGAAATCCACTCGCGTTCCTCAGATTCGCCTTCAATCGGCCAGCCGAATCACCGTCCTCCGCCGCCACGCTCCCGCTCCTCAAAATCGAAGCGCTCAGAATCGCCGTCGCATTCTCCCTCCCGTGCTCGAATCCTCGCGCGATCCCGTCGCCGACGTCGATTTCGTCGGAGAGCACGGAGATCGAGATTGGATCGTAGACAAAGGCGATCTTCTTGCTAGGGTTTACGGCGGTGAAATTGAGGTCGAATCTGGAGTTGAGAACAGAGGAGGGAGTGATGTTGAGGTAAGAGAGCGTGAGGGAATTGACGGTGAAGGAAGGGCGGTGGGGGCGGTAGATGATGTAGAAGGCGGTGCCGGCGACGCCgacgaggaggaggaggatgagaGTGAGGAGGAGGAACCAGAAACAGAGTGTGAAGCAGGATCTGCGGCGGGTGTGGcggtggtggtagtggtggtaggGGCGAGGACGGTAGGCGGGTTGGTTGGCGGCGGCGTAGCGTTGGGGCTTTGA 1932 0.4896 MANQTTCPACNLQRGNCAPNCPSSALVTHRQFLNAHKQFGADNVAKILQRFHNNPIPPQNDEATRSSTVFYSDSDMLLLLRHQIVRLQYELDRVTQSLANFSSLSSYDQQLLIHRLRDQLNLYLNINNAAAASSSAAAVPPPVIYQEQRRLICSIVDQLNLYLDSNAIAASSSSAVPPQICEQQLRIHTAASAVPPPVHHNQPYYSHNFLDHNQELAPLMQPEAYIMIGDRQMNAAQDDLAYLMRWQLRNQNYGGGGGGGYNVGDELLCDPNDARNNNNNRRSASIDQLRIGADDQLVEQRSDDQRVQNQNQNENPVIHQDDNKKEGLRVKDKRDYLTVNPRQETRTDCKAKISLVLQDGKLRVKEFVEEHNHVLHTMQTAHMLASQQHVSEIQAHEIEPLPPFSPNFNDPFPNLQPNTNLALRVGSRRRRQLLPGGRINRNSITRNPYPNLRCLHRPSHLRLHLRFQNHSQRKSTRVPQIRLQSASRITVLRRHAPAPQNRSAQNRRRILPPVLESSRDPVADVDFVGEHGDRDWIVDKGDLLARVYGGEIEVESGVENRGGSDVEVREREGIDGEGRAVGAVDDVEGGAGDADEEEEDESEEEEPETECEAGSAAGVAVVVVVVGARTVGGLVGGGVALGL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0391 643 MobiDBLite consensus disorder prediction 303 317 - -
Sto1g0391 643 Pfam Lateral organ boundaries (LOB) domain 7 56 IPR004883 -
Sto1g0391 643 Pfam FAR1 DNA-binding domain 324 376 IPR004330 -
Sto1g0391 643 MobiDBLite consensus disorder prediction 589 611 - -
Sto1g0391 643 MobiDBLite consensus disorder prediction 571 615 - -
Sto1g0391 643 MobiDBLite consensus disorder prediction 300 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0391 Sto-Chr1 3214682 3223239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0391 6 101 AS2 family AT3G13850 37.615 1.93e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto1g0391 FAR1 3.8e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0391 - - lja:Lj4g3v0620710.1 97.4413