Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0387 ATGGCAAGCACCGGCATGAAAGCGAAGGCCAGACGAGGTTGTGGTTGGCGATCCAGTCGTAGAGAACAGGGACCAGAGACTTCCACTGAGTGTACCTCTCATCCACCGAAGGCGCACTGCCCTTGCCAGATTCCTTCATTCCCTCAGAGGAATTCTAGGTTTCTTTTTTCTTCTCTGATCACCATGGTGGTTGAAGACAGTAGTAATGATGGGGTTCGATTTGATGATGGTTCAAGTTCAACAGAAGAATGGTTGTTTCATGCGCAGAAACTTGTCCCTCTTGCTCTTGATAAAGCAAAAGAGGTAAAGGGATTTCCTGGAAGGTGGAAGATGATCATATCAAAACTAGAACAGATCCCATCTCGTTTATCAGACTTATCTAGCCACCCTTGCTTCTCTAAGAATACTCTTTGCAAGGAGCAATTGCAGGCAGTGTCAACAACACTGACAGAAACTACTCATTTGGCTGAGCTTTGCGTGAAGGAGAAGTACGAAGGCAAGCTTCAGATGCAGAGCGATCTCGATGCCTTGTCTGGGAAACTCGATTTAAATTTGAAAGATTGTGGCTTATTGATCAAAACTGGGGTTCTCAGCGAAGCTACTTTGCCATTAGACATGCCAGAACCAGATTTTTCAAGCAATATGAGGGAATTACTTGCCCGCCTTCAGATCGGACACTTGGAGTCAAAACACAAAGCTATAGATAGACTCAATGATGTGATGAAAGAAGATGAAAAGAGTGTTTTAGCTGTTTTGACTCGTAGTAATGTAGCTTCTTTGGTTCAATTGCTCACAGCCACATCTCCAAGGATAAGAGAGAAAACCGTCACTATTTTATGTTCTCTTGCAGAATCAGGTAGCTGCGAGAACTGGCTAGTTTCTGAAGGAGTTATTCCACCTTTGATAAGACTGATTGAATCAGGAAGTGCCATTGGCAAAGAGAAGGCTGCTATATCCCTTCAGAGGCTCTCCATGTCATCTGAAACAGCTCGCTCCATAGTAGGACATGGTGGGGTTTGCCCGCTCATCGGTCTTTGTCAAACCGGTGACTCTGTGACACAAGCTGCATGTGCTTGTACTTTGAAGAACATATCGGCTGTCCCTGAGGTTCGACAAGTTCTAGCAGAGGAAGGGATTGTGAAGGTAATGATCAGTCTCCTAAATTGCGGAATCTTGCTGAATTCCAAAGAATATGCAGCTGAATGCCTGCAGAATCTCACTTCGAGCAATGAGAATCTAAGAAGGCTCGTCATATCTGAAGGTGGGGTTAGAAGTCTTTTGGCTTATCTAGATGTTCCACTTCCCCAAGAGTCCTCAGTGGGAGCACTGAGGAATTTAGTAGGATCCATTCCTGAGCATTCTCTTGTTTCTCTTGGTGTCCTTCCTCGCTTGGCCCATGTTCTAAAATCCGGGTCTATGGGGGCCCAGCAAGCGGCTGCTTCTGCAATCTGCCGAATTTGCAGCTCAGgagagatgaagaagatggtTGGCGAAGCCGGGTGTATTCCTCTCCTTGTGAATATTCTCGAGGTTAAGTCGAATGGCGCTAGAGAGGTTGCTGCACAAGCACTTTTGAGCTTAATTGCACTGACTCAGAATCAAAGAGAGGTGAAGAAGAATGATAAGAGTGTGCCTAATCTTGTTCAACTGCTTGATCCTAGTCCACAGAATACTGCAAAGAAATATGCTGTTTTGTGCCTAGCATCGCTTTCTTCGAGTCAAAAGTGTAGGAAGTTGATGATTTCTTATGGGGCAATTGGGTATCTTAAGAAGCTCACAGAGATGGACATTCCAGGTGCTAAGAAGCTACTTGAGAAACTGGAAAGAGGGAAATTGAGAAGCTTGTTTAGCAGAAAGTAG 1860 0.4446 MASTGMKAKARRGCGWRSSRREQGPETSTECTSHPPKAHCPCQIPSFPQRNSRFLFSSLITMVVEDSSNDGVRFDDGSSSTEEWLFHAQKLVPLALDKAKEVKGFPGRWKMIISKLEQIPSRLSDLSSHPCFSKNTLCKEQLQAVSTTLTETTHLAELCVKEKYEGKLQMQSDLDALSGKLDLNLKDCGLLIKTGVLSEATLPLDMPEPDFSSNMRELLARLQIGHLESKHKAIDRLNDVMKEDEKSVLAVLTRSNVASLVQLLTATSPRIREKTVTILCSLAESGSCENWLVSEGVIPPLIRLIESGSAIGKEKAAISLQRLSMSSETARSIVGHGGVCPLIGLCQTGDSVTQAACACTLKNISAVPEVRQVLAEEGIVKVMISLLNCGILLNSKEYAAECLQNLTSSNENLRRLVISEGGVRSLLAYLDVPLPQESSVGALRNLVGSIPEHSLVSLGVLPRLAHVLKSGSMGAQQAAASAICRICSSGEMKKMVGEAGCIPLLVNILEVKSNGAREVAAQALLSLIALTQNQREVKKNDKSVPNLVQLLDPSPQNTAKKYAVLCLASLSSSQKCRKLMISYGAIGYLKKLTEMDIPGAKKLLEKLERGKLRSLFSRK 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0387 619 SUPERFAMILY ARM repeat 200 598 IPR016024 -
Sto1g0387 619 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 67 619 - -
Sto1g0387 619 SMART arm_5 367 408 IPR000225 GO:0005515
Sto1g0387 619 SMART arm_5 489 529 IPR000225 GO:0005515
Sto1g0387 619 SMART arm_5 326 366 IPR000225 GO:0005515
Sto1g0387 619 SMART arm_5 531 572 IPR000225 GO:0005515
Sto1g0387 619 SMART arm_5 409 448 IPR000225 GO:0005515
Sto1g0387 619 SMART arm_5 449 488 IPR000225 GO:0005515
Sto1g0387 619 SMART arm_5 244 284 IPR000225 GO:0005515
Sto1g0387 619 Gene3D - 455 599 IPR011989 -
Sto1g0387 619 MobiDBLite consensus disorder prediction 1 37 - -
Sto1g0387 619 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 378 421 IPR000225 GO:0005515
Sto1g0387 619 Pfam Armadillo/beta-catenin-like repeat 330 366 IPR000225 GO:0005515
Sto1g0387 619 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 67 619 - -
Sto1g0387 619 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 296 338 IPR000225 GO:0005515
Sto1g0387 619 Gene3D - 188 454 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0387 409 594 U-box Gene Family AT2G23140 28.866 1.59e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0387 - - rcu:8258512 850.892