Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0372 ATGAGTCGAGAACCGAAGCGAGGGAAGCAAGAAAAGGGTTCTGATGGTGCTGAGAAGGTCATCGTCGCCGTTAAGGCATCGAAGGAATTTCCTAAGGCTGCTCTTGTGTGGTCTCTGACTCATGTTGTTCAACCTGGGGATTGCATTACTTTGTTAGTGGTTGTGCCTTCACAAAGTTCAGGTAGAAGATTATGGGTATTTCCGAGATTTGCGGGCGACTGTGCCAGTGGGAACAAGAAATCTTCAGGAACGTGTTCAGATCAGAAGTGTGACATCACTGATTCTTGTTCCCAGATGATCCGTCAGCTCCATGATGTCTATGATCCAAATAACATTAATATCAAGATTAAAATTGTTTCCGGATCGCCTTGTGGAGCAGTAGCTGCTGAGGCCAAGAAAGCCCAAGCTAATTGGGTTGTCTTAGACAAACAGCTTAAACATGAGGAAAAGCGGTGCATGGAAGAACTACAATGTAATATTGTGGCAATGAAGAGGTCCCAACCGAAAGTACTCCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCTTGAAGAAGCTGACCCATTGCCTTCCAAGCAAGATGAGATGCCTGGAAAACAATCCAAACAGAAGACGGAgtctttaaattccataaaagCACCAGTTGTCACTCCAACTAGCAGCCCGGAACTAGGGACACCATTTACTGCAACCGAAGCCGGCACCTCATCAGTTTCAAGCTCAGATCCCGGGACCTCGCCATTTTTTGTCTCGGAGGTGAATGGTGagttaaagaaagaagaaacaatCAAGGAAAACCAAGAACTCGATGATACTAATTCAGATACAGACAGTGAAAACATGTCCACATCTTCAGCAAGCTTGAGATTCCAGCCGTGGATCACAGAATTACTTTTACATCAACGATCATCTCAACACACAGAGGAAAGATCTGAGAGATCTCATGATAAGCCTCAAACATCAACGACCCGAGCTTTGCTAGAGAAGTTCTCAAAGCTTGAGAGAGAATCTGGAACTGAGATGTCAGCCTATAGAACTGAATTGGATTTCAGTGGAAACGTTAGGGAAGCAATCGCATTATCCAGAAATGCTCCACCCGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGTTGGAGCTTGCTACTGGTGGATTTTCGCAGGCCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACCGAGGGGTTCTACCGGATGGGCAAGTCATTGCCGTCAAGCAACATAAATTGGCTAGCTCTCAGGGTGATCTAGAGTTTTGCTCAGAGGTAGAGGTCTTAAGCTGTGCACAGCATCGGAATGTTGTTATGCTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTACATATGCAATGGATCACTGGATTCTCATTTATATGGGAGACAACGAGAGACATTAGAGTGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGCTACGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGCGGCCAAACAACATTCTTATCACTCATGATTTTGAACCACTGGTCGGTGATTTCGGGTTGGCAAGGTGGCAGCCTGATGGAGACACCGGAGTGGAAACCAGAGTAATTGGAACCTTTGGGTATTTGGCTCCAGAGTATGCTCAAAGTGGCCAAATCACTGAGAAGGCTGATGTATATTCCTTCGGGGTGGTATTAGTGGAGCTCGTGACTGGGCGAAAAGCTGTGGATCTCAATCGGCCTAAAGGACAGCAGTGTCTTACTGAGTGGGCAAGGCCGCTGTTAGAAGAATACGCCGTTGATGAACTGATTGATCCAAGGCTGGGAAATTGCTATTCAGAAAATGAGGTCCATTGGATGCTGCATGCTGCCTCATTATGTATACGGCGAGATCCTCATTCTCGACCCCGCATGTCGCAGGTTCTCCGAATCCTCGAAGGCGATATGGTGATGGACACAAATTACCTATCAACTCCGAGTTATGACGGCGGGAGCCAGAGCGGTCGAATCTGGGGAGAGCACCAGCAGAGGCAACACCATTACAGTGGACCTCTATCGGACGATTCGCTAGAAGCCTTCAGTGGGAAGCTATCTCTGGAAAAATACAGGTCTTCTTCTTCCTATTGGGACAAGGCTAGGAGAACTGCATTTGAAGAAGATGATATGTAA 2247 0.4584 MSREPKRGKQEKGSDGAEKVIVAVKASKEFPKAALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWVFPRFAGDCASGNKKSSGTCSDQKCDITDSCSQMIRQLHDVYDPNNINIKIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVAMKRSQPKVLRLNLVGSQKKDLEEADPLPSKQDEMPGKQSKQKTESLNSIKAPVVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFVSEVNGELKKEETIKENQELDDTNSDTDSENMSTSSASLRFQPWITELLLHQRSSQHTEERSERSHDKPQTSTTRALLEKFSKLERESGTEMSAYRTELDFSGNVREAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRETLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAVDELIDPRLGNCYSENEVHWMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDTNYLSTPSYDGGSQSGRIWGEHQQRQHHYSGPLSDDSLEAFSGKLSLEKYRSSSSYWDKARRTAFEEDDM 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0372 748 MobiDBLite consensus disorder prediction 692 711 - -
Sto1g0372 748 MobiDBLite consensus disorder prediction 180 201 - -
Sto1g0372 748 Gene3D Transferase(Phosphotransferase) domain 1 477 682 - -
Sto1g0372 748 ProSiteProfiles Protein kinase domain profile. 401 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0372 748 PANTHER OS01G0253100 PROTEIN 15 705 IPR045271 GO:0004714|GO:0006468
Sto1g0372 748 CDD STKc_IRAK 407 673 - -
Sto1g0372 748 Pfam Protein kinase domain 405 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0372 748 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Sto1g0372 748 MobiDBLite consensus disorder prediction 301 324 - -
Sto1g0372 748 SUPERFAMILY Protein kinase-like (PK-like) 385 682 IPR011009 -
Sto1g0372 748 MobiDBLite consensus disorder prediction 302 319 - -
Sto1g0372 748 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Sto1g0372 748 MobiDBLite consensus disorder prediction 254 271 - -
Sto1g0372 748 MobiDBLite consensus disorder prediction 202 248 - -
Sto1g0372 748 MobiDBLite consensus disorder prediction 180 286 - -
Sto1g0372 748 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0372 Sto-Chr1 3028339 3032430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0372 381 690 Trihelix Transcription Factor Family AT1G70460 52.038 2.54e-101 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sto1g0372 Pkinase 4.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0372 - - gmx:100816340 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0213 9 1908696 1913015 Sto1g0372 1 3028339 3032430 CCT
Sto1g0372 1 3028339 3032430 Sto1g0372 1 3028339 3032430 ECH