Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0348 ATGGCATCACATTTCCTATTTGCTGTGTTTCAACTATTTCTTATAACTCTCACAGTCCTTGTTGATTCCCAGAATCAAACAGGATTCATCAGTATTGATTGTGGACTTATTGATGAAGAAAGCTACACAGATGAAACTACTTCCATCTCTTACACTTCAGATTCCACCTTCACATCCACTGGTATTTCCCACACAATATCATCCAAACACAAAACTCAGACACTCCAAAGGCAATTCTGGAATCTCAGAAGCTTCCCAGAAGGTTCTAGAAACTGCTATACCCTTGATGCTCCCTCAGACATCAGCAACAGCAAGTACTTGGTAAGGGCTAGGTTCATGTATGGAAACTATGATGGTAAAGAATATGTTCCTCAATTTGATCTCTTTCTTGGGGCTAAAAGGTGGGATTCAGTGGAGTTTGAGGATGAAGAAAGTGTAGTGACAAAGGAAATCATCTATTCTGCTTCATCAGGTTATGTTCATGTGTGCCTTCTGAACACCAATAATGGAACACCTTTTATATCAGTTTTGGAGCTTAGAGTTGTGGATAGTGATGGCTTTTTGGTTAGCTCTTTGGAGCTTTTGGATAGGTTTGATTTAGGGTTGCAAGAAGGTGGATTAGTCAGATACCCAGATGATGCCTATGATCGAATTTGGACACCTTATAACTCAACTAACTGGAAACAGATAAATACCTCTCTCCCTATAGGccaatcatcatcttcttcatcattatatatcacattacctccctccaTTGTAATGAGTACAGCAGAAACTCCAGAAAATACCAGCAACAACATAGAATTTCACTTCCAGCAAAATTCTGAAAATGCCTCCACATATTATGCCTACATGTATTTTGCTGAAGTCCAGGAGCTGCAAGAAAACCAAACCAGAGAATTCAACATTTTTGTGAATGGAGAACTTTTAACTTCAGCCAGTCCTTTTTACCTTCAGAGCACTTATTATTTAGCAGTAGTAATGGACTCTTCAATGGATATTTTGATTAATGAAACTGATAAATCAACTCTTCCACCACTCATCAATGCCATTGAGATATATATGACTAAGGACCTCTCACAATCACAGACAGACCAAACAgatgCCGATGCTATCATGAACATCAAGTCAACTTATGGGATCAAGAGAAACTGGCAAGGAGACCCTTGTAATCCACAGGATTACTTGTGGGATGGTCTTAATTGCAGCTATAATGGATCTGGTTCACAAAGGATCATATCTTTGAACTTATCATCCAGTGGATTAATTGGAAATATAGCTCCTGACATATCCAATCTGAAGTTTTTAGAGTATTTggatttgtcAAACAATAGTTTAGTTGGGAATGTACCTATGTTCCTGTCTCAACTGCACTCCTTGAGGGTTCTGAACCTGGAAGGAAATCAGCTATCAGGAACAATTCCAACAGAACTCACTGAGAGGTCCCAGAATGGATCACTTAAattcagTAAATTTTTACCTGTTCTTGTTAATGCAAGTTTTGGTGGAAATCCAAATCTTTGCTCTTCAGATTCATGCAAGAGTAGTAAGACAAACGTTGTAATTCCAGTAGTGGCATCACTAGCTGGAGCTTTCATTCTTCTAGCAGCCATAATTGCTTTCTGTATCttcaaaagaagaagacaaaaaagaagaaaacaagACCATTCTTATTCCATAATAGATAAGGAGTTAAAGTCAAAGAAACAACAATTAACATATGCTGAAGTTTCAAGCATTACCAATAACTTTGAAAAGCTTGTGGGCAAAGGGGCATTTGGAACTGTGTACCATGGCTTCTTAGGTAATACTCAGGTTGCTGTCAAAATGCTGTCTTCTTCAACTCAAGGATATCTGCAATTTCAAGCCAAGCTTCTTGCTAGAGTTCACCATAAATGCTTGACTGCTCTTATTGGGTTTTGTGATGATGGCACCAACATAGCTCTCATCTATGAGTATATGGCTAATGGAGACTTAGCTAAACATTTATCAGGGTTGGAGTATCTACATAAGGGTTGTAAGCCACCAATTATACATAGGGATGTTAAATCCAATAACATCCTATTGAACGAAACATGTCGAGGGAAAATAGCTGATTTTGGGTTGTCGAAAATGTTTTCTGAAGAGGGTGATACCCATGTGTTCACAGTTATTGCCGGCACCCCAGGATACCTCGACCCTGAgtacaataaatcaaacaagttGAATGAGAAAAGTGATGTCTACAGCTTTGGAGTTGTTCTACTAGAGATAATTACAGGAAGACCTGCCATAGCCAAAGATACTGAAGAGAAAGCTCACATAGTTGAATGGGTTCATTTCATGCTCTCTGAAAGAGAGATTGAAGAGATTGTGGATTCAAGATTACTAGGAAATTTTGGTACTGATTGTGCAAGAAAAGCCTTGGATACTGCAATGGCTTGTGTTTCACCCACTTCCCTTAATAGGCCAACCATGAGTGAAGTAGTGATGGATTTAAGACAGTGTTTGGCAATGGAGACAACTCCATCAGTGCCTTATAGTCAAATTGATTTCTCCTTTGGTGGGATTAGTGAAGTGAGTTCTTTAGCAAGATAG 2580 0.3717 MASHFLFAVFQLFLITLTVLVDSQNQTGFISIDCGLIDEESYTDETTSISYTSDSTFTSTGISHTISSKHKTQTLQRQFWNLRSFPEGSRNCYTLDAPSDISNSKYLVRARFMYGNYDGKEYVPQFDLFLGAKRWDSVEFEDEESVVTKEIIYSASSGYVHVCLLNTNNGTPFISVLELRVVDSDGFLVSSLELLDRFDLGLQEGGLVRYPDDAYDRIWTPYNSTNWKQINTSLPIGQSSSSSSLYITLPPSIVMSTAETPENTSNNIEFHFQQNSENASTYYAYMYFAEVQELQENQTREFNIFVNGELLTSASPFYLQSTYYLAVVMDSSMDILINETDKSTLPPLINAIEIYMTKDLSQSQTDQTDADAIMNIKSTYGIKRNWQGDPCNPQDYLWDGLNCSYNGSGSQRIISLNLSSSGLIGNIAPDISNLKFLEYLDLSNNSLVGNVPMFLSQLHSLRVLNLEGNQLSGTIPTELTERSQNGSLKFSKFLPVLVNASFGGNPNLCSSDSCKSSKTNVVIPVVASLAGAFILLAAIIAFCIFKRRRQKRRKQDHSYSIIDKELKSKKQQLTYAEVSSITNNFEKLVGKGAFGTVYHGFLGNTQVAVKMLSSSTQGYLQFQAKLLARVHHKCLTALIGFCDDGTNIALIYEYMANGDLAKHLSGLEYLHKGCKPPIIHRDVKSNNILLNETCRGKIADFGLSKMFSEEGDTHVFTVIAGTPGYLDPEYNKSNKLNEKSDVYSFGVVLLEIITGRPAIAKDTEEKAHIVEWVHFMLSEREIEEIVDSRLLGNFGTDCARKALDTAMACVSPTSLNRPTMSEVVMDLRQCLAMETTPSVPYSQIDFSFGGISEVSSLAR 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0348 859 Pfam Protein kinase domain 586 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0348 859 ProSitePatterns Protein kinases ATP-binding region signature. 589 610 IPR017441 GO:0005524
Sto1g0348 859 Gene3D Ribonuclease Inhibitor 370 490 IPR032675 -
Sto1g0348 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Sto1g0348 859 SMART serkin_6 583 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0348 859 ProSiteProfiles Protein kinase domain profile. 583 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0348 859 Gene3D Transferase(Phosphotransferase) domain 1 655 841 - -
Sto1g0348 859 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 839 - -
Sto1g0348 859 SUPERFAMILY L domain-like 369 482 - -
Sto1g0348 859 Pfam Malectin-like domain 32 356 IPR024788 -
Sto1g0348 859 PANTHER OS07G0107800 PROTEIN-RELATED 13 839 - -
Sto1g0348 859 Gene3D Phosphorylase Kinase; domain 1 565 654 - -
Sto1g0348 859 SUPERFAMILY Protein kinase-like (PK-like) 568 827 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0348 Sto-Chr1 2804940 2811782 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0348 9 832 Receptor kinase-like Gene Family AT2G19210 46.806 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto1g0348 Malectin_like 7e-101 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0348 - - gmx:100778537 1018.07