Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0346 ATGGATAACTCCATGGCTCTAGTAAAATACAGGTACAATAAATATGTAGAGGCAATATACCCGAGCTTCAGTCAATTGAGTTATAGGGTGTCCATATTTGATCATATGGATCATCTGGGGAAGCTTCTGACATTCCAAAACTGCCTTTCAGGGGACTTTGCCTTATATTCTGTGTTTCAATTTTGCTTGACTCTTACAATTCTGGTTCATGCCCAGAATCCACCAGgattcattaGCTATGACTGCGGACTTGAGGATGAACAGAAGTACAGAGATAACAACACTAAACTCACGTACGAATCAGATAATCCCTACATAGAAAGTGGTGAAAGCTACAGCATATCAGCAGAATATAAGAATAATTCCCTTGGAAGACAGTTTTGGAATGTTCGAAGCTTTCCTGAGGGAAATAGGAACTGCTATTCCCTTCCTACCTTCATTCCAGATCTCACCAGTGGTAATCAATATATAATCAGAGCAAGATTCATGTATGGAAACTACGATCACAAGAACTCTCCTCCGAAATTTGATCTCTATTTGGGAGCCACATTCTGGGATTCTGTGGAGTTTGAAAATGAATACACCATAGTAACCAAGGAATTCCGTTACCCTTCCCGGTTCGACGACTACATTCATGTTTGTCTTTGTAACACCAACCAGGGTACACCTTTCATATCAGTTTTAGAGCGCAGATTAACCAGCGCCGACTTTGACTTTTGCCATGGCATGGTGTTGGCACGCTATAATCTGGGCTCAGATGATGGTAAAATAGTGAGATATCCAGATGATGTTTCTGATCGAATATGGACGCCCTATACTTCAGATGAGTTGTACCACATAAACACCTCACATCCAGATCCAGAAAAGATTGTTAAATCTGATCTAAAAGGCTTACCTTCCATTGTTATGGCAACAGCAGCAATTCCGGCAAATGGCAACCACATAACACTTAAATTCCATCCCAGGTTTAACGCCTCTGAGCATTTCTCCATAGCGTACATTGCTGAAATCCAGAATCTCCACGGAAATCAAGTTCGAGATCTCGAGATTTCAGCGACTGGGCAACCAACTGTTTTCGTGCCATCTTACCGCCCTCGCTACTTGGAAGCCGAGCTCCTTGGTTTGGGACCACAAAGAGAAGCCGCGCCTGAAGACGGATGGCAAATTTGGATCAACAGAACAAGGAATTCAACTCTTCCCCCAATTCTCAATGCCATCGAGACGGTCCAATTAAAAGACGTCTCACCGTCACACACACACAGGAATGATTATGAAGCTATCAAGAAGGTCAAGAAAATGTATGGAATCACCAGAAACTGGCAAGGAGATCCTTGTACGCCTAGAGCTTCCATATGGGAAGGTCTTAACTGCACCAATAGTGGATCAGAAATCGATCCTTACAGAATCACACATTTGGATTTATCCTCTTGGGGGTTAAAAGACAACATTTCTCCTTCCATATCTGATTTGATCCATTTGAGATACTTGGATCTGTCAAATAACAAACTAACCGGGAATGTGCCTGATTCTCTATCTCAACTAGAGTTGTTGACTTTTCTAAACATAGAAGGAAATAAACTTACAGGGACAATACCAGCAGAGCTCATTGGGAGATCCAACAATAAAAAGCTTCAATTTAGATGGGAGAGAAATCCAGGTCTGTGCTACCCTGGTCCTTGCAAAGAGAAGGGCATGAGCAATACAGCCATTGCAGTAGTAGCAACATTTGGAGGGGCCTTCATAATAGTATTATTTGCTACTACCTTCTCCATATTTAAAAAGAGACAACAAGTTGGAAATAATCCCAAGACGCAAGGTTTTTATTCCAACATAAGTAAGAGGATGATGGTGCTATCCAACATCAAGAAGAAGGTAGGATCAGAGAAACAACAACTTACATATGCAGAAATCCTTAGTGTTACCAACAACTTTGAAAGAATTGTGGGGAAAGGAGGATTTGGAACAGTCTATCATGGTCAACTGGGTAACACTCAAGTTGCTGTTAAGATGCTTTCTCCTTCAACTCAAGGATTCCAGCAATTCCAGTCTGAGGCCAACCTCCTTACTAGAGTTCATCATAAATGCTTGACTTCTCTTCTTGGGTATTGCCATGAAGGCACCAATATAGCACACATCTATGAGTACATGCCAAATGGAGACTTAGCTATGCATCTATCAgGTTTGGAGTACTTGCATAATGGTTGTAAACCACCAATTATTCACAGAGATATTAAACCTAGAAACATCCTGCTTGATGAAAATTTTCGGGGTAAAATAGCTGATTTTGGATTGTCAAGGATATTTCCTGACGAAGGTGACACCCATGTGCTCACAGCTGAATTCCACCACCTTTTTCCCTGCAGGTACTATACATCAAACCGTTTGAATGAAAAGGGTGATGTTTTCAGCTTTGGAGTTGTTTTGCTTGAGCTAATTACTGGCCAACCTGTGATCACCAAAACTGAAGAGAAAACCCACATAATTCAATGGGTTGGTTCCATCATGCCTGAGAGGGAGATTCATGATATTGTGGATTCAAGATTGCAAGGAGAGTTTGGCATTGAATTTTCTGCAAGGAGAGCCTTAGATATTGCTTTGGCTTGTGTACAACCAAGACCCATTAACAGGCCAAGCATGAGTCAGGTGGTCATGGAATTGAAACAATGTTTGGTTATGTATCAGATTACTCCACATTCTGATGCTAACTATCTTACTGAATCTGACACATCCAATATGTTAATTGATGTCTCCAATTCAATGGATAGTGTTAGTGTAGAGAGTTCTCTGTGA 2790 0.4104 MDNSMALVKYRYNKYVEAIYPSFSQLSYRVSIFDHMDHLGKLLTFQNCLSGDFALYSVFQFCLTLTILVHAQNPPGFISYDCGLEDEQKYRDNNTKLTYESDNPYIESGESYSISAEYKNNSLGRQFWNVRSFPEGNRNCYSLPTFIPDLTSGNQYIIRARFMYGNYDHKNSPPKFDLYLGATFWDSVEFENEYTIVTKEFRYPSRFDDYIHVCLCNTNQGTPFISVLERRLTSADFDFCHGMVLARYNLGSDDGKIVRYPDDVSDRIWTPYTSDELYHINTSHPDPEKIVKSDLKGLPSIVMATAAIPANGNHITLKFHPRFNASEHFSIAYIAEIQNLHGNQVRDLEISATGQPTVFVPSYRPRYLEAELLGLGPQREAAPEDGWQIWINRTRNSTLPPILNAIETVQLKDVSPSHTHRNDYEAIKKVKKMYGITRNWQGDPCTPRASIWEGLNCTNSGSEIDPYRITHLDLSSWGLKDNISPSISDLIHLRYLDLSNNKLTGNVPDSLSQLELLTFLNIEGNKLTGTIPAELIGRSNNKKLQFRWERNPGLCYPGPCKEKGMSNTAIAVVATFGGAFIIVLFATTFSIFKKRQQVGNNPKTQGFYSNISKRMMVLSNIKKKVGSEKQQLTYAEILSVTNNFERIVGKGGFGTVYHGQLGNTQVAVKMLSPSTQGFQQFQSEANLLTRVHHKCLTSLLGYCHEGTNIAHIYEYMPNGDLAMHLSGLEYLHNGCKPPIIHRDIKPRNILLDENFRGKIADFGLSRIFPDEGDTHVLTAEFHHLFPCRYYTSNRLNEKGDVFSFGVVLLELITGQPVITKTEEKTHIIQWVGSIMPEREIHDIVDSRLQGEFGIEFSARRALDIALACVQPRPINRPSMSQVVMELKQCLVMYQITPHSDANYLTESDTSNMLIDVSNSMDSVSVESSL 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0346 929 Gene3D Transferase(Phosphotransferase) domain 1 716 906 - -
Sto1g0346 929 PANTHER TYROSINE KINASE FAMILY PROTEIN 59 727 - -
Sto1g0346 929 PANTHER TYROSINE KINASE FAMILY PROTEIN 726 918 - -
Sto1g0346 929 PANTHER OS07G0107800 PROTEIN-RELATED 726 918 - -
Sto1g0346 929 PANTHER OS07G0107800 PROTEIN-RELATED 59 727 - -
Sto1g0346 929 ProSitePatterns Protein kinases ATP-binding region signature. 648 669 IPR017441 GO:0005524
Sto1g0346 929 Gene3D Phosphorylase Kinase; domain 1 629 715 - -
Sto1g0346 929 ProSiteProfiles Leucine-rich repeat profile. 492 514 IPR001611 GO:0005515
Sto1g0346 929 SUPERFAMILY Protein kinase-like (PK-like) 629 886 IPR011009 -
Sto1g0346 929 Pfam Leucine rich repeat 470 527 IPR001611 GO:0005515
Sto1g0346 929 Pfam Protein kinase domain 645 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0346 929 ProSiteProfiles Protein kinase domain profile. 642 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0346 929 SMART serkin_6 642 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0346 929 SUPERFAMILY L domain-like 432 537 - -
Sto1g0346 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Sto1g0346 929 Gene3D Ribonuclease Inhibitor 424 546 IPR032675 -
Sto1g0346 929 Pfam Malectin-like domain 81 409 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0346 Sto-Chr1 2790555 2800071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0346 61 912 Receptor kinase-like Gene Family AT2G19210 40.447 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto1g0346 Malectin_like 1.2e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0346 - - gmx:100778537 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0346 1 2790555 2800071 Sto1g0346 1 2790555 2800071 ECH