Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0344 ATGGGAGAACGTTTCTTGTTTGCAGTGATTCAACTCTCTTTCACTCTCACAGTTATTGTTCATGCCCAGGATCCAACAGaTTTCATTAGTATTGACTGCGGACTTGGGGGCAAACAAACATATGTAGACAAAGCAACTGGTCTCAATTACACCTCAGATGATAAATTCATAGACACAGGTAAAAGCCACAGCATCTCACCGGAATATAAGGCAAAGTCCCTTGAAAAGCAGTTTTGGAATGTCAGAAGCTTCCCTGTGGAAAACAGGAACTGCTATTCCTTCAATGCTCCTTCTTCAGCTGATACAGGTTTTACACAATATATAGTGAGAGCTAGATTCATGTATGGAAACTACGATGGAAAGAACTCTACCCCCATATTCGATATCTATCTGGGAAACAACAAATGGGATTCTGTGGAGTTTGAGAATGCATCCACTATTGTCACCAAAGAAATCCTATATACTCCCATATCAGAGTATATTCATGTTTGCCTTTGCAACATCCACAGGGGTACACCTTTCATTTCAGTTTTAGAGCTTAGACCCATTATTAATGGTTCAAACCCAGATGCATCATATGAACTGTTTGCAAGGTTTGATATCAGTTCACAAGATGGTAAAATAGCCCGGTACCCAGAGGATCCACTTGATCGAATTTGGACACCCTATAACTCAATTGACTGGACAACGATAAGCGCTCCACTTGAGGCATCAGGTGAATATGATTCGGTCCCATCTCGTGTCATGAGAACCGCAGCAACTCCAGCTAATGGTAGTGACAGTATTTACTTCAAGTTCAGTTATAATGCCTCTGTATATTACTTGAACCTATATCTTGCTGAAGTTCAGAAGCACGGCCCAAATCAAACTAGAGAATTCAACATTTTTATCGATGGGGTcctaaaatattcaaatttccAACCTCAGTTCCTCAAGACACCCTACCCTTTGGATTCCTACAACTACACAAATTCTTATGGAACTTTGGATGTTTTGATCAAAAGAACTAATAGATCAACTCTTCCACCCATTCTCAATGCCATCGAGATGTACATCGTTAGGGATACCTCACAACGAGAAACAAACAAGAGAGAATATGATGCTCTGAAGAACATCAAGTCAACTTACAATATAAAGAGAAACTGGCAAGGGGATCCTTGTCTCCCAAAGGATTACATGTGGGAAGGTCTTAACTGCAGCAATGTTGAAGGATCTGGCAACCCTAGAATCACATCCTTGAATTTATCTTCAAGTGGATTGTCTGGGAAGATAACTAGTGACATATTCACTCTGGAATCAATAGAATATTTGGATTTgtcaaataacaatttaattggGGAAGTATCTGATGTCCTATCTCGGTTGAATTCCTTGAAAGTTCTAAAGCTAGAAGGAAATCATCTGTCAGGAACAATTCCACCGAAGCTCCTTGACAGATGGGAAAAAGCAATGAATTTCTCTGTTGATGTgattacttattttttattaacactTCCCTGGAAATCTCTTTCTATGAATGAAAGTTGTCGCGGAAATCCAAATCTTTGCTGCCCGGGTTCTTGCAATAAGGAAATACATAAGGtggtcattattattattatagtagCATCATTGGTTGGGGCATTCTTAGTGTTTGCAGCAATAGCTTTCTGGATATTCAAGAGAAGACAACCAGCTGCCAAAAGCTTGAAAAAGCCAAGTCTTGAGCTCACGGTTGGTAAGGGAATAGACTCAAATAAACAACAATTCAGTTATGAGGAAGTCAAGAGCATTACCAGCAACTTTGGAAGGGAGCTGGGAAAAGGAGGGTTTGGAACTGTATTCCTTGGCTATATTGGTAAAACTCAAGTAGCTGTCAAAATGCTCTCTCCTTCATCTCATTCTCATTGGTATCTTCAATTTCAGGCTGAGGCAGAACTTCTTACCACAGTTCACCATAAGTGCTTGACTGCTCTGATTGGTTACTGTGATGATGGAACCAATGTGGCTCTCATTTACGAGTATATGGCAAATGGAGACTTGGCTGACCATCTCTCAGGATTGGAGTACTTGCACAATGGTTGTAAGCCACCAATAGTTCACAGAGATATTAAACCTCAAAACATACTATTAAACGAAAACATGAGAGCCAAACTTGGTGATTTTGGGTTGTCAAGGATCTTCTCTAATGAAACTGACACTCACATTTCCACTGTCATTGCTGGAACTTTCGGATACCTCGATCCTGAGTACTATCTGTCCAACAAGTTGAATGAAAAAAGTGATATTTATAGCTTTGGAATTGTTCTGCTCGAAATACTCACAGGGAGACCTGCCATATTcaaaaatgaagagagagatCACATAACCCATTGGCTGGATTCTATGGCAGTTGATAGGGAGATTAATGATATTGTAGATTCAAGATTACATGGAGAATTTGACATTGACTCTGCAAGAAAATTCTTGGATACAGCAATGGCTTGTGTGGCTTCAACCTCCATTGATAGGCCAACCATGAGTCAAGTATTGATGGAATTGAAACAATGTATGGGAATGGTGATAACTCCAGTCGTTGATGCTTATGGGAACATAGACATACCCAGTTGTATGATAGATGTCTCCTTTGAGATGATTAGTGGTCAAAGTTCTTTAGCAAGGtag 2643 0.3867 MGERFLFAVIQLSFTLTVIVHAQDPTDFISIDCGLGGKQTYVDKATGLNYTSDDKFIDTGKSHSISPEYKAKSLEKQFWNVRSFPVENRNCYSFNAPSSADTGFTQYIVRARFMYGNYDGKNSTPIFDIYLGNNKWDSVEFENASTIVTKEILYTPISEYIHVCLCNIHRGTPFISVLELRPIINGSNPDASYELFARFDISSQDGKIARYPEDPLDRIWTPYNSIDWTTISAPLEASGEYDSVPSRVMRTAATPANGSDSIYFKFSYNASVYYLNLYLAEVQKHGPNQTREFNIFIDGVLKYSNFQPQFLKTPYPLDSYNYTNSYGTLDVLIKRTNRSTLPPILNAIEMYIVRDTSQRETNKREYDALKNIKSTYNIKRNWQGDPCLPKDYMWEGLNCSNVEGSGNPRITSLNLSSSGLSGKITSDIFTLESIEYLDLSNNNLIGEVSDVLSRLNSLKVLKLEGNHLSGTIPPKLLDRWEKAMNFSVDVITYFLLTLPWKSLSMNESCRGNPNLCCPGSCNKEIHKVVIIIIIVASLVGAFLVFAAIAFWIFKRRQPAAKSLKKPSLELTVGKGIDSNKQQFSYEEVKSITSNFGRELGKGGFGTVFLGYIGKTQVAVKMLSPSSHSHWYLQFQAEAELLTTVHHKCLTALIGYCDDGTNVALIYEYMANGDLADHLSGLEYLHNGCKPPIVHRDIKPQNILLNENMRAKLGDFGLSRIFSNETDTHISTVIAGTFGYLDPEYYLSNKLNEKSDIYSFGIVLLEILTGRPAIFKNEERDHITHWLDSMAVDREINDIVDSRLHGEFDIDSARKFLDTAMACVASTSIDRPTMSQVLMELKQCMGMVITPVVDAYGNIDIPSCMIDVSFEMISGQSSLAR 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0344 880 SUPERFAMILY L domain-like 366 476 - -
Sto1g0344 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Sto1g0344 880 Gene3D Transferase(Phosphotransferase) domain 1 669 849 - -
Sto1g0344 880 ProSitePatterns Protein kinases ATP-binding region signature. 599 620 IPR017441 GO:0005524
Sto1g0344 880 PANTHER TYROSINE KINASE FAMILY PROTEIN 11 880 - -
Sto1g0344 880 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Sto1g0344 880 SUPERFAMILY Protein kinase-like (PK-like) 578 840 IPR011009 -
Sto1g0344 880 PANTHER OS07G0107800 PROTEIN-RELATED 11 880 - -
Sto1g0344 880 SMART serkin_6 593 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0344 880 Pfam Protein kinase domain 596 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0344 880 ProSiteProfiles Protein kinase domain profile. 593 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0344 880 Gene3D Phosphorylase Kinase; domain 1 575 668 - -
Sto1g0344 880 Pfam Malectin-like domain 31 352 IPR024788 -
Sto1g0344 880 Gene3D Ribonuclease Inhibitor 365 485 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0344 Sto-Chr1 2774421 2778454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0344 6 844 Receptor kinase-like Gene Family AT2G19210 44.533 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto1g0344 Malectin_like 3.9e-92 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0344 - - gmx:100778537 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0344 1 2774421 2778454 Sto9g0245 9 2260225 2295728 CCT
Sto1g0344 1 2774421 2778454 Sto1g0344 1 2774421 2778454 ECH