Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0343 ATGGCAGAACTCTTGGTTTTTGCAGTGATGATTCAGTTTTGCTTGACTCTTACAATTCTGGTTCATGCCCAGAATCCATCAGgCTTCCTTAACATTGACTGTGGACTTGAGGATGAACACAAGTCCAGAGATGATAACACTAAACTCATTTACGAATCAGATAAGCACTACAACTACATAGAAAGCGGTGAAAGCCACAGCGTATCGCCAGAATACAAGAATAATTCCCTTGAAAGACAGTTTTGGAATGTTCGAAGCTTTCCTGATGGAAAGAGGAACTGCTATTCCTTTGATACCTACATTCCAGATATCGGCGATGTTAGTCGATGTATAATCAGAGCAAGGTTCTTGTACGGAAACTACGATCGAAAGAACTTACCTCCAAGATTTGATCTGTATTTGGGATCCACATTCTGGGATTCCGTGGAGTTTGAAAACGCATCCACCATAGTAACCAAGGAATTCCATTACACTGCTGGATACGACTATATTCATGTCTGTCTCCATAACACCAATCAGGGTACACCTTTCATATCGGTTTTAGAGCGCAGAGCAATCGTCGATAACATTAATATTTACGATGGCATAGTGTTGGCACGCTATAATTTGGGCTCAGATGATGGTAAAATCGTCAGATATCCAGAAGATGGTTTTGATCGAATATGGACGCCCTATACCTCACATGAATTGTACAACATCAACACCTCAGATCCGGAAAAGATTCAATCTCAGCGAGATGAATATCCACCTTCCACTGTTATGGCAACAGCAGCAATTCCGGCAAATGGCAACTACATAACACTGAAATTCCATCCCAGGTTTAATGCCTCTACGTATTTCTCCGCGCTGTACTTTACTGAAATCCAGAAGCTCCGTGGAAATCAAATTAGAGAATTCGAGGTTACAGGGAACGGACAAGTAATGAATTTTGTTAAACCATACAGCCCTCCCCCATTCCAAGCTGACTACTATTCTTTGTTGCCACAAGAAGAAGGAGTAGCCGCGCCTAAAGATGGATGGCAAATTTGGATCAATAGAACGAGGAACTCAACTCTTCCCCCCATTCTCAATGCCATCGAGATGATCCAGATAAAAGAAATCTCAGTATCGCGCACAGAAAGAAAAGATTATGAAGCTGTAAAGGAGATCAAGCGAATGTATGGAATCAAGAGAAACTGGTATGGAGATCCTTGTACACCAAGTGCCTACATGTGGGAAGGTCTTAACTGCAGCAATAGTGGATCTGAAACCGATCTGTACAGAATCACACATTTGGATTTATCCTCTAGCGACCTAGATGAGGTCATAGCTCCTTCGATATCCAGCTTGACTCATTTGAGATATTTGGATCTGTCAAATAACAAATTGATTGGGAATGTGCCTGAATCCCTAGCTAAACTAGAGTCCTTGACATTTCTAAACATAGAAGGAAATAAACTGACAGGAACAGTACCAGCAGAGCTCATTAAGAGATCAAACCATACAAAGTTTCaatttagCTGGGGGAGAAATCCAGACCTCTGCTATCCGGGTCCTTGCGAAAAGAAGCACAAGAACAAGGTAGTCATTCTAGTGGCAGCAACATTTGGAGGGGCCTTCATAGTAGCATTATCAGCTATCACCTTCTTCatatttaaaaagagaaaacaagTTGGCAAGAATCCCAACGCTCAAGGTTTTTATTCCAGCATAAGTAAGAGGCCGATGTTATTATCCAACATCAACAAGGTAAGATCAAAGAAACAACGACTTACATATGCTGAAATCCTAAGTATTACCAACAACTTTGAAAGAATTGTGGGGAAAGGAGGATTTGGAACAGTCTACCATGGCCAACTTGGTAACACTCAAGTTGCTGTTAAGATGCTTTTTCCTTCAACTCAAGGATTCCAGCAATTTCAGTCTGAGGCCAACCTCCTTACCAGAGTTCATCATAAATGCTTGACTCCTCTCCTTGGGTATTGCCATGAAGACAGCAATATAGCATTGATCTATGAGTACATGCCAAATGGAGACTTAGCTAAGTATTTATcagGCTTGGAGTACTTGCATAATGGTTGTAAGCCACCAATTATTCACAGAGATATTAAGCCCAGAAACATCCTTCTTAATGAAAAAATGCGAGGTAAAATAGCTGATTTTGGGTTGTCAAAGATATTTCCTGAAGGTGACACCCATGTGTTCACAGTCATTGCTGGCACCCCAGGTTACTTAGCTCCTGAGTACTATGCTTCAAACCGGTTGAATGAAAAAAGTGATGTTTTTAGCTTTGGAGTTGTTTTGCTTGAACTAATCACCGGCCAACCTGCAATAACCAAAACTAAAGAGAAAACTCACATAATTCAATGGGTTGGATCCATGCTCCTTGAAAGGGAAATTCATGATATTGTGGATACAAGGTTGCAAGGAGAATTTGACATTGATTCTGCAAGGAAAGCCTTAGATACTGCAATGGCTTCTGTAGCACCAATATCCATTAATAGGCCAAGCATGAGTCAGGTGGCAATGGAATTAAAACAATGTTTGGTCATGGAGATGACTCAAGATTCTGATGTTAATGGTTGTACTTCCAACAGTTTTGCTGAATCTGATACATCCAATAGGCATCCATTGTTATCTGCAGATTATGCCTGCAAATCCTTTTCAAACATGTCAGGACACTACTTATTTACAGTTTTTCAGCTTTTTCTAACTCTAAGACTTCTAGTTCATGCCCAAGATCAATCAGATTTCCTTAGCCTTGACTGTGGACTTGAGGATGAACTAAgctataaagataatattactAATTTAACTTACCAATCAGATAAGGGCTACACAGAAAGTGGTGTGAGCAATCATATATCATCAGAATATAAGAGCAAGTACCTTGACAAGCAGTTTTGGTATGTAAGAAGCTTCCCAGTGGGAAACAGGAACTGCTATTTTTGTCCTGCTCATTTTTCAACTGTTGAAGGAGGTACACACTATTTGGTGAGAGCTAGATTCATGTATGGAAACTACGATCACAATAAATTTCTCCCGAAATTCGATATCTATGTTGGAACCAGGTGGTGGGACACTGTGGAGATTGAGACTGCATCAAGTATAATCACCAAGGAAGTCATCTATACTACTCAGTCAGATCACATTGAGGTTTGCCTTTGTAACATCAACAAGGGTACACCTTTTATATCTGTTTTGGAACTTAGACCTTTTACTCTTTACCAAGGGACAGATATGGAGCTGTTTGCACGGTTTGATTTAGGCTCACAAGACAGTAAAATAGTCAGATACCCAGATGATGGTTCGGATCGAATATGGACACCCTATAACTCAGTTAATTGGACAACAATAAGTGCTCCAAAAACAGAAGTTGGAAAGCTGGATTACCAAGCTGCTCCTGCCAGAATCATGAAAACTGCAGCAACTTCAGGAAATGGTAGTGACAGTATGTACTTGCGGCTCAGCTACAATGCTTCttcatatgtcttctacatatatttTGCTGAAGTACAGAAACTCAACAAAAGTCAAATTAGAGAGTTTGATGTTACTTTAAATGGTGGTGAATTCCTAGCATACCACTACCAACCTCAGTACCTAGGCAccaatttttttgttgtttcaaATTACTCAAATACTTATAAAAATTTGGAACTTCAGTTCAAAAGAACATCTGGAGCCACTCTTCCACCGATTCTCAATGCCATTGAGATATACATGATGAAGGATCTTCGACAACGTGAAACAAACAAAGCAGATCATGATGttatcaagaatatcaagtcaACTTACGAAATCGACAGAAACTGGCATGGGGATCCTTGTATCCCAGAGGATTACATGTGGGAAGGTCTTAACTGTAGCTATGCTCAGGGATCTGGTACACCTAAAATCACATACTTGAATTTATCATCCAGAGGATTAACTGGAAATATAGATGATGACATATCTTTTCTGAAATCTATAGAAGTTCTGGATTTGTCACATAACAATTTAACTGGGGAAATACCTGATTCCCTCTCTCAGTTGAACAACTTGCAAGTTCTGAAGCTTGAAGGAAATAACCTGAGAGGAACAATTCCACAACAGCTCCTTGAGAAATCAGAGAAAGGATTGCTTAAACTCAGTTGTCATGGAAATCAAAATCTTTGCTGTCCGGGTTTCTgcaaagagagaagaagagataGTAAGACTACTGTTGTGATTCCATTAGTAGCATcacttggtggagcattcttatTAATTGCAGCAATAACTTGCTGGATAATCAAAATAAGAAAACCAGGTACCAGAAATGCTCTTATGTCTTTCTCTCTAACTCTTGTGGTTCTTGTCACAGCTGCCAAAACCTTGCACCAACCAAGTTTTGATTTTCCACTCAGCAAGGGAATAGACTCAGATAAACAGCAATTCACATATGATGAAGTCAAGAGCATTTCCAACAACTTTGGAAGGATGCTGGGGACAGGAGGATTTGGAACCGTATACCATGGCTATATAGGTAACACCCAGGTTGCTGTCAAAATGCTCTCTCCTTCAGCTCATGGGTATCTGCAATTTCAGGCTGAGGCAGAGCTTCTTACAAGAGTTCACCACAAGTGCTTGACTTCTCTAATTGGATATTGTGAAGAAGGCACCAATGTGGCTCTCATCTATGAGTATATGGAAAATGGAGATCTGGCTTACCATCTATCTGGATTGGAGTACTTGCACAATGGTTGTAAGCCCCCAATAGTTCACAGAGATATTAAACCTCAAAACATATTACTAAGCGGAAACATGAGGGCTAAGCTTGCTGATTTTGGGTTGTCAAAGATCTTCACTGATGAAGGTGAGACACATGTTTCCACTGCAATTGCTGGCACCTTGGGATACCTTGATCCAGAGTACTTTATGTCAAACAGGTTGAATGAGAAAAGTGATGTTTTCAGTTTCGGAGTTGTTCTGCTTGAAATAATTACAGGCCAACCTGCTATAACCAGAACAGAAGAGAATACTCACATAACTCAAAGGTTTAGTTCAATGGCAGATGAAGAGGAGATTCACCATATCATTGATTCAAGATTACAAGGTGAATTTAACCCAAATTCTGCAAGGGAAGTCTTGAATACCGCAATGGCTTGTGTAGCACCAACTTCAATGGATAGGCCAACCATGAGTCAAGTGGTTATGGAATTGAAACAATGTTTAGGAATGGTGATCACTTCCACATCTCATAATCACAGCACTGTACCTGATTTTATGATTGATGTCTCCTTTGACATGATTAGTGGAGAGAGTTCTTTAGCAAGGTAG 5280 0.3917 MAELLVFAVMIQFCLTLTILVHAQNPSGFLNIDCGLEDEHKSRDDNTKLIYESDKHYNYIESGESHSVSPEYKNNSLERQFWNVRSFPDGKRNCYSFDTYIPDIGDVSRCIIRARFLYGNYDRKNLPPRFDLYLGSTFWDSVEFENASTIVTKEFHYTAGYDYIHVCLHNTNQGTPFISVLERRAIVDNINIYDGIVLARYNLGSDDGKIVRYPEDGFDRIWTPYTSHELYNINTSDPEKIQSQRDEYPPSTVMATAAIPANGNYITLKFHPRFNASTYFSALYFTEIQKLRGNQIREFEVTGNGQVMNFVKPYSPPPFQADYYSLLPQEEGVAAPKDGWQIWINRTRNSTLPPILNAIEMIQIKEISVSRTERKDYEAVKEIKRMYGIKRNWYGDPCTPSAYMWEGLNCSNSGSETDLYRITHLDLSSSDLDEVIAPSISSLTHLRYLDLSNNKLIGNVPESLAKLESLTFLNIEGNKLTGTVPAELIKRSNHTKFQFSWGRNPDLCYPGPCEKKHKNKVVILVAATFGGAFIVALSAITFFIFKKRKQVGKNPNAQGFYSSISKRPMLLSNINKVRSKKQRLTYAEILSITNNFERIVGKGGFGTVYHGQLGNTQVAVKMLFPSTQGFQQFQSEANLLTRVHHKCLTPLLGYCHEDSNIALIYEYMPNGDLAKYLSGLEYLHNGCKPPIIHRDIKPRNILLNEKMRGKIADFGLSKIFPEGDTHVFTVIAGTPGYLAPEYYASNRLNEKSDVFSFGVVLLELITGQPAITKTKEKTHIIQWVGSMLLEREIHDIVDTRLQGEFDIDSARKALDTAMASVAPISINRPSMSQVAMELKQCLVMEMTQDSDVNGCTSNSFAESDTSNRHPLLSADYACKSFSNMSGHYLFTVFQLFLTLRLLVHAQDQSDFLSLDCGLEDELSYKDNITNLTYQSDKGYTESGVSNHISSEYKSKYLDKQFWYVRSFPVGNRNCYFCPAHFSTVEGGTHYLVRARFMYGNYDHNKFLPKFDIYVGTRWWDTVEIETASSIITKEVIYTTQSDHIEVCLCNINKGTPFISVLELRPFTLYQGTDMELFARFDLGSQDSKIVRYPDDGSDRIWTPYNSVNWTTISAPKTEVGKLDYQAAPARIMKTAATSGNGSDSMYLRLSYNASSYVFYIYFAEVQKLNKSQIREFDVTLNGGEFLAYHYQPQYLGTNFFVVSNYSNTYKNLELQFKRTSGATLPPILNAIEIYMMKDLRQRETNKADHDVIKNIKSTYEIDRNWHGDPCIPEDYMWEGLNCSYAQGSGTPKITYLNLSSRGLTGNIDDDISFLKSIEVLDLSHNNLTGEIPDSLSQLNNLQVLKLEGNNLRGTIPQQLLEKSEKGLLKLSCHGNQNLCCPGFCKERRRDSKTTVVIPLVASLGGAFLLIAAITCWIIKIRKPGTRNALMSFSLTLVVLVTAAKTLHQPSFDFPLSKGIDSDKQQFTYDEVKSISNNFGRMLGTGGFGTVYHGYIGNTQVAVKMLSPSAHGYLQFQAEAELLTRVHHKCLTSLIGYCEEGTNVALIYEYMENGDLAYHLSGLEYLHNGCKPPIVHRDIKPQNILLSGNMRAKLADFGLSKIFTDEGETHVSTAIAGTLGYLDPEYFMSNRLNEKSDVFSFGVVLLEIITGQPAITRTEENTHITQRFSSMADEEEIHHIIDSRLQGEFNPNSAREVLNTAMACVAPTSMDRPTMSQVVMELKQCLGMVITSTSHNHSTVPDFMIDVSFDMISGESSLAR 1759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0343 1759 SMART serkin_6 1476 1725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0343 1759 SMART serkin_6 594 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0343 1759 SMART LRR_typ_2 443 466 IPR003591 -
Sto1g0343 1759 SMART LRR_typ_2 467 491 IPR003591 -
Sto1g0343 1759 SMART LRR_typ_2 1314 1337 IPR003591 -
Sto1g0343 1759 SMART LRR_typ_2 1338 1362 IPR003591 -
Sto1g0343 1759 ProSitePatterns Protein kinases ATP-binding region signature. 600 621 IPR017441 GO:0005524
Sto1g0343 1759 SUPERFAMILY Protein kinase-like (PK-like) 580 843 IPR011009 -
Sto1g0343 1759 Gene3D Phosphorylase Kinase; domain 1 1458 1549 - -
Sto1g0343 1759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1573 1585 IPR008271 GO:0004672|GO:0006468
Sto1g0343 1759 SUPERFAMILY Protein kinase-like (PK-like) 1462 1734 IPR011009 -
Sto1g0343 1759 SUPERFAMILY L domain-like 1248 1380 - -
Sto1g0343 1759 ProSiteProfiles Leucine-rich repeat profile. 1316 1338 IPR001611 GO:0005515
Sto1g0343 1759 ProSiteProfiles Protein kinase domain profile. 594 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0343 1759 PANTHER OS07G0107800 PROTEIN-RELATED 893 1759 - -
Sto1g0343 1759 PANTHER OS07G0107800 PROTEIN-RELATED 13 679 - -
Sto1g0343 1759 PANTHER OS07G0107800 PROTEIN-RELATED 679 862 - -
Sto1g0343 1759 Gene3D Phosphorylase Kinase; domain 1 576 667 - -
Sto1g0343 1759 Pfam Leucine rich repeat 422 480 IPR001611 GO:0005515
Sto1g0343 1759 Pfam Leucine rich repeat 1291 1351 IPR001611 GO:0005515
Sto1g0343 1759 SUPERFAMILY L domain-like 384 491 - -
Sto1g0343 1759 ProSiteProfiles Protein kinase domain profile. 1476 1739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0343 1759 Pfam Protein kinase domain 597 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0343 1759 Pfam Protein kinase domain 1479 1718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0343 1759 Gene3D Transferase(Phosphotransferase) domain 1 668 862 - -
Sto1g0343 1759 Gene3D Transferase(Phosphotransferase) domain 1 1550 1739 - -
Sto1g0343 1759 ProSitePatterns Protein kinases ATP-binding region signature. 1482 1503 IPR017441 GO:0005524
Sto1g0343 1759 Pfam Malectin-like domain 32 363 IPR024788 -
Sto1g0343 1759 Pfam Malectin-like domain 914 1235 IPR024788 -
Sto1g0343 1759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Sto1g0343 1759 PANTHER TYROSINE KINASE FAMILY PROTEIN 679 862 - -
Sto1g0343 1759 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 679 - -
Sto1g0343 1759 PANTHER TYROSINE KINASE FAMILY PROTEIN 893 1759 - -
Sto1g0343 1759 Gene3D Ribonuclease Inhibitor 1249 1371 IPR032675 -
Sto1g0343 1759 Gene3D Ribonuclease Inhibitor 378 498 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0343 Sto-Chr1 2763221 2773941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0343 4 842 Receptor kinase-like Gene Family AT2G19210 42.417 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto1g0343 Malectin_like 1.2e-81 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0343 - - minc:123206351 1351.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0343 1 2763221 2773941 Sto1g0343 1 2763221 2773941 ECH