Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0342 ATGGCAGGATGTCTCTTCTTGCCAGTGCTTCTGTTTTCTTTGACTACAGTTTTTGTAGATGGCAAGAATCCACCAGGCTTCATTAGCATCGATTGTGGACTTGTTAATGAAACAAGCTATGTGGACAATAATACTAAGCTCACTTACCAagcagatgatgatgatgatagcttgatAAACAGTGGAAAAAGCTACAGTATATCAGCAGAGCACAAGACCAATTCCCTTGATAGACAATTTTGGTATGTCAGAAGTTTTCCAGAGGGAAATAGGAATTGCTATGTCTTGGATAATCCTTCTCGAGGTAATGACAGTGTACAATATTTAATCAGAGCCAGGTTCATGTATGGTAACTATGATCAACAAAACTCCACTCCAAAATTTGATCTTTATATTGATGTCTCATTCTGGGATTCTGTGGAGTTTGATAATGCATCCAGCATAGTGACTAAAGAAATTGTTTACCCTTCTGTATGGAATGACCAAATTCATGTTTGTCTTTGTAAAAACAAGGGTACACCATTTATATCAGTTTTGGAGCGCAGATTAGTTCAAAATTATGGCTCTGAATTTGGATTTGGCGGCATCCTCATGGCGCGCTTGAATCTAGGCTCAGAGGATGGTAAAATAGTGAGATATCCAGATGATGAATATGATCGAATATGGACACCCTATTACTCACGTGACTTGAGTCCCATAAGTACTTCACTTAACGTCTCAGTAGATGATTCTATGTACACCACATTCTCTGTCCCTTCCATTGTTATGAAAACAGCAGCAATCCCTGCAGATTTCAGTGATTATATAGCATTCTCTTTCAGTCCCATGAATGATTTCTCCATGTATGAGCCATTGCTGTACTTCACTGAAATTCAGAATCTTTCAAACCAAATTAGAGAATTCAACATTTTTGTGGGTGAGGATAATCACTGGTCTCCATCAGAACCATACCAACCTCCCTACCTATATGCTGAAGCATATGATGTTGAAGGTCTATATGGGGCAACTGGAAGACAAAATGTCAGTGAAACTAATATTTCTGAGGCAATCCTACTTGTTGTCACAGTTAACAAGCCCAACAACACTCAAGGTTTCCATTCCAGCATAAGTAAGAGGCTGATGTTGTTATCCAACATCAAGAAGAAGGTAGGATCAAAGAAACAACAACTTACATATGCAGAAATCCTTGATATCACCAACAACTTTGAAAGGGTTGTGGGAAAAGGAGGATTTGGAACAGTCTACCATGGCCATCTAGGTAACACTCAAGTTGCTGTTAAGATGCTCTCTCCTTCAACTCAAGGGTATCTGCAATTCCAGGCAGAGGCCAGACTTCTTACCAAAGTTCATCACAAGTGTTTGACTCCTCTCCTGGGGTACTGCCATGAAGGCACCAATATGGCACTTATTTATGAGTATATGCCAAATGGAGACTTAGCTAAGTATCTATCAGGTTTGGAATACCTGCACAAAAGTTGTAAACCACCCATTGTTCACAGAGATATTAAATCTAGAAACATCTTGGTGGATGAGAAATTGAGGGGTAAAATAGCTGATTTTGGATTGTCAAAAATCTTTCCTGAAGAAGGTGAAAGCCATGTACTCACAGTTATTGCTGGCACCCCAGGATATCTAGATCCTGAGTACTATGTGTCAAGCAGGTTGAATGAGAAAAGTGATGTGTTTAGCTTTGGGGTTGTTCTACTTGAACTAATAACAGGCCGGCCTGCAATCAGAAAAAGTGAGGAAAAAGCTCACATAATTCAGTGGGTGAGTTGTATGGTGCCTGAAAGGGAGATTCATGATATTGTGGATTCAAGATTAGGAGGAGAATATGAGTGTGGCTCTGTAAGGAAAGTCTTAGATACTGCCATGGCTTGTGCAGCATCAAGTTCCATGAATAGGCCAAGCATGAGTGAGGTTGTTGTGGAATTGAAACAATGTTTGGCTATGGAGATGACTCCACAATCCATTATTCAAGGGACTACTTTTACTTGA 1998 0.3929 MAGCLFLPVLLFSLTTVFVDGKNPPGFISIDCGLVNETSYVDNNTKLTYQADDDDDSLINSGKSYSISAEHKTNSLDRQFWYVRSFPEGNRNCYVLDNPSRGNDSVQYLIRARFMYGNYDQQNSTPKFDLYIDVSFWDSVEFDNASSIVTKEIVYPSVWNDQIHVCLCKNKGTPFISVLERRLVQNYGSEFGFGGILMARLNLGSEDGKIVRYPDDEYDRIWTPYYSRDLSPISTSLNVSVDDSMYTTFSVPSIVMKTAAIPADFSDYIAFSFSPMNDFSMYEPLLYFTEIQNLSNQIREFNIFVGEDNHWSPSEPYQPPYLYAEAYDVEGLYGATGRQNVSETNISEAILLVVTVNKPNNTQGFHSSISKRLMLLSNIKKKVGSKKQQLTYAEILDITNNFERVVGKGGFGTVYHGHLGNTQVAVKMLSPSTQGYLQFQAEARLLTKVHHKCLTPLLGYCHEGTNMALIYEYMPNGDLAKYLSGLEYLHKSCKPPIVHRDIKSRNILVDEKLRGKIADFGLSKIFPEEGESHVLTVIAGTPGYLDPEYYVSSRLNEKSDVFSFGVVLLELITGRPAIRKSEEKAHIIQWVSCMVPEREIHDIVDSRLGGEYECGSVRKVLDTAMACAASSSMNRPSMSEVVVELKQCLAMEMTPQSIIQGTTFT 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0342 665 Gene3D Transferase(Phosphotransferase) domain 1 474 660 - -
Sto1g0342 665 SMART serkin_6 400 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0342 665 SUPERFAMILY Protein kinase-like (PK-like) 387 645 IPR011009 -
Sto1g0342 665 ProSiteProfiles Protein kinase domain profile. 400 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0342 665 Gene3D Phosphorylase Kinase; domain 1 381 473 - -
Sto1g0342 665 PANTHER OS07G0107800 PROTEIN-RELATED 370 657 - -
Sto1g0342 665 PANTHER OS07G0107800 PROTEIN-RELATED 14 308 - -
Sto1g0342 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Sto1g0342 665 ProSitePatterns Protein kinases ATP-binding region signature. 406 427 IPR017441 GO:0005524
Sto1g0342 665 Pfam Malectin-like domain 30 329 IPR024788 -
Sto1g0342 665 PANTHER TYROSINE KINASE FAMILY PROTEIN 370 657 - -
Sto1g0342 665 PANTHER TYROSINE KINASE FAMILY PROTEIN 14 308 - -
Sto1g0342 665 Pfam Protein kinase domain 403 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0342 Sto-Chr1 2757323 2762370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0342 385 662 Receptor kinase-like Gene Family AT1G51890 52.492 1.76e-104 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto1g0342 Malectin_like 5.6e-75 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0342 - - pvu:PHAVU_005G162000g 387.497