Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0329 atgatgatgataatgagacACTTGAGCTTCATCATCTTGCTCTGGCTCAATACCTATCCTCTCGATCGCAACCTAGTGTTCGATTATTTCGCATTATCTCCCTTCTACGACTGGACCTGCAATAATGAACAGCTTCGAATGCGCTCCATTCACCCTCTCGATATCTCTCAATTATCGAAAATGACAGGCATAGAGTATATGCTCAGTGAAGTTATGGAACCCCACCTTTTTGTTATTCGCAAGCAAAGGAGAGATGGCCCTGAGAAAGTTACACCAATGCTGGCATATTACATATTGGATGGTTCAATATACCAAGCACCACAACTATGCAATATTTTTGCCGCTCGAATTGGAAGGGCACTTTATCACATACAAAAGGCTTTTAGTACGGCTGCATCAAAactagGTTATTCACCGTCGAGTACAGTGACTAATTTCCTCGTTAAATTGGACTATGATGCTGAAAGTGAGAGGCAAGAAGGAGTGCAGAACTTCTACAGAAAAAATCACATTTACCAGACACATGATTTTGTAAGCATCAAATCctga 549 0.3916 MMMIMRHLSFIILLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQRRDGPEKVTPMLAYYILDGSIYQAPQLCNIFAARIGRALYHIQKAFSTAASKLGYSPSSTVTNFLVKLDYDAESERQEGVQNFYRKNHIYQTHDFVSIKS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0329 182 Pfam MED6 mediator sub complex component 13 134 IPR007018 GO:0003712|GO:0006357|GO:0016592
Sto1g0329 182 Gene3D Mediator complex, subunit Med6 3 131 IPR038566 -
Sto1g0329 182 PANTHER MED-6-RELATED 5 157 IPR007018 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0329 Sto-Chr1 2577727 2591141 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Sto1g0329 Med6 1.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0329 K15128 K00469 sspl:121766550 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0329 1 2577727 2591141 Sto1g0329 1 2577727 2591141 ECH