Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0327 ATGGACATCAAACAAAGCTACAAGTTGGTTAACGTTAAACAATGGCAAGGAGATCCTTGTCtaccattttcttcttcttgggaTGGACTAAACTGCAGCAACAATGGATATGATGGACCAAGAATAAAGGCACTAAACCTAGCCTCCAGTGGATTGACaggaaaaataatttcatcattttCCAAGCTTAAATATTTAGAATACTTAGATTTATCACACAATAGCTTAACTGGACCAGTGCCTGATTTTTTGTCACAATTGCCAAACTTGAGGACTCTAAATTTGGCAGGAAACAGGCTCTCGGGTGTAATTCCAGCACTTCTCAACGAAAGATCAAATAATGGGTCACTTTCATTgagTGTGGATGGAAATCCGGATCTTTGTCTGACAGCTCAATGCAAAAAGGATGAAAAGAATAATGCTCCACTACTTGCAGCCATTCTTTCCTCAGTAGTAGTCtttattattttggttattgTAGTCATTGTTATCTGGAAAAGAAGATGCAACAGAAAACCAGTTcttttagcagaaaatcaacCAGTGAGTTCGTGCGAAGAAGTTGTACTAAAGTCAAACAATAAACAGTTCACATACTCACAGATAGTAGCTATTACCAATAACTTCCAGAAAATGATTGGGAAAGGAGGATTTGGAACTGTTTATCTTGGCTCTTTGTCTGATGACACACAAGTTGCTGCTGAACTCCTCATGCGAGTTCATCATCGAAACTTAACTGCATTCCTCGGATACTGTAATGAAGCTGAACGTACCGCTATCATCTACGAATACATGGCTTATGGGAATTTAGAGGAGTGCCTTTCAGGTTCAAGGAAAGAATTATCGAGTTGGAAAAATAGGATTCAAATAGCAGTTAATGCCGCTCAAGGACTCGAGTATTTGCATTATGGTTGCAAGCCTCCGATAATCCATAGAGACATAAAGACAGCAAACATTTTACTGGATGAGAAAATTCAGGCCAAAGTTGCTGATTTTGGGTTCTCAAAGTTCTATTCTACTGAAAATGAAAGCCATATATCAACTGCAGTTGTTGGCACACCTGGATACGTTGACCCAGAATACTACTCATCCAGCAGGCTCAACGAGAAAAGTGACGTTTATAGTTTTGGAATTGTGCTTTTGGAGCTTATTACAGGCAGGCCAGCAATAATAAAAAGTCATGAGAACACTAACATTGTGCATTGGGTTACCCCATTTATAGCAAGAGGAGACTTACAACAAATTGTTGATCCAAGGCTGCAGGGAGATTTTGATTTTGGTTCCATGTGGAAAGCTGTGGAAGCTGCAATAGCTTGTGTGCCTCCAGTTGCTATCCAAAGGCCGTCCATGAGTTACATTGTCACTGAACTGAAAGAGTGCTTAGAAATGGAAGCAGCTCGTGAACAAACACAAGGCACAGATGAACAAATTCCAAGATCAAACAGCTCATTTGAGATGGATATTGTTGATGTTGAAACTGCATCTGGTCCAGAAGCAAGATAG 1503 0.3806 MDIKQSYKLVNVKQWQGDPCLPFSSSWDGLNCSNNGYDGPRIKALNLASSGLTGKIISSFSKLKYLEYLDLSHNSLTGPVPDFLSQLPNLRTLNLAGNRLSGVIPALLNERSNNGSLSLSVDGNPDLCLTAQCKKDEKNNAPLLAAILSSVVVFIILVIVVIVIWKRRCNRKPVLLAENQPVSSCEEVVLKSNNKQFTYSQIVAITNNFQKMIGKGGFGTVYLGSLSDDTQVAAELLMRVHHRNLTAFLGYCNEAERTAIIYEYMAYGNLEECLSGSRKELSSWKNRIQIAVNAAQGLEYLHYGCKPPIIHRDIKTANILLDEKIQAKVADFGFSKFYSTENESHISTAVVGTPGYVDPEYYSSSRLNEKSDVYSFGIVLLELITGRPAIIKSHENTNIVHWVTPFIARGDLQQIVDPRLQGDFDFGSMWKAVEAAIACVPPVAIQRPSMSYIVTELKECLEMEAAREQTQGTDEQIPRSNSSFEMDIVDVETASGPEAR 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0327 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Sto1g0327 500 Gene3D Ribonuclease Inhibitor 2 126 IPR032675 -
Sto1g0327 500 SUPERFAMILY L domain-like 13 113 - -
Sto1g0327 500 Gene3D Phosphorylase Kinase; domain 1 236 265 - -
Sto1g0327 500 ProSiteProfiles Protein kinase domain profile. 207 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0327 500 Gene3D Transferase(Phosphotransferase) domain 1 266 485 - -
Sto1g0327 500 SUPERFAMILY Protein kinase-like (PK-like) 186 457 IPR011009 -
Sto1g0327 500 PANTHER KINASE-TRANSFORMING PROTEIN RAF, PUTATIVE-RELATED 2 500 - -
Sto1g0327 500 ProSiteProfiles Leucine-rich repeat profile. 89 111 IPR001611 GO:0005515
Sto1g0327 500 Gene3D Phosphorylase Kinase; domain 1 182 235 - -
Sto1g0327 500 PANTHER OS07G0107800 PROTEIN-RELATED 2 500 - -
Sto1g0327 500 Pfam Leucine rich repeat 40 100 IPR001611 GO:0005515
Sto1g0327 500 PRINTS Leucine-rich repeat signature 66 79 - -
Sto1g0327 500 PRINTS Leucine-rich repeat signature 87 100 - -
Sto1g0327 500 Pfam Protein tyrosine and serine/threonine kinase 233 401 IPR001245 GO:0004672|GO:0006468
Sto1g0327 500 SMART serkin_6 207 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0327 Sto-Chr1 2561721 2565677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0327 1 500 Receptor kinase-like Gene Family AT1G51800 44.234 2.66e-152 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sto1g0327 PK_Tyr_Ser-Thr 7.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0327 - - aprc:113853796 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0327 1 2561721 2565677 Sto1g0327 1 2561721 2565677 ECH