Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0301 ATGCCGGTACTGCGTAGTGGAGTGCGCAGGGGCCGGGCAGCAGTAAAGAAACAGCGACGGGAGCCGCTAGATAAAGTGTTGATTGGAGAAGAGGAAGGTATTGCAACGAGGACAAGGAGGAGGCGTGCAGCGGCGGCAGCAGCGGCAGTGCCGAAGACTAACGAACAACGGAAGCAGGTGGTTGACGAGAACGTAGCTGTACCGGCAAAAGAGGAAGAGCAAAAGAGTTTGGACGAAGCTGTTCGTGTAGGTGAAGGTGAAGCTGCAGCTGGCGGAGCGGAGAGGGAAGAGGTAGGGGAGAAACAGATGGATGATTACGGTAGTGGAGGTCGGAGCAATGATAAGGGCAATGCCGGTGAAGATGAGGGGAGCACAGCTCCGATTCCTGAGAAGGTTCAAGTAGGTGGGTCTCCTATGTACAAAGTAGATAGAAAACTGGGCAAGGGTGGATTTGGGCAAGTTTATGTTGGTCGACGTGTATCTGCTGTAAATATGAATGAGAGGACTGGATCTGGAGCTGTTGAGGTTGCACTAAAATTTGAGCATAGAAGTAGTAAAGGATGTAACTATGGACCACCATATGAGTGGCAAGTGTACAACACTCTTGGTGGCAGTCATGGTGTGCCCCGAGTACACTACAAGGGCAAGCAAGGTGAATATTATGTCATGGTTATGGATATGCTGGGCCCTAGTTTGTGGGATGTTTGGAATAATAACTCTCACTCAATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCCATATTGGAAAAGATGCACTCTAGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGGCCTCCTGGGACACCTGATGAGAAGAAACTGTTCCTTGTTGATCTTGGATTAGCTACTAGATGGAGGGATAATACAACAGGTTTGCATGTGGATTATGACCAACGGCCAGATGTTTTCAGGGGTACAGTCCGCTATGCAAGTGTGCATGCACACTTAGGCAGAACTGGAAGCAGGAGGGATGATCTGGAATCTCTTGCTTATACTCTGATTTTCCTCCTTCGTGGTCGTCTTCCTTGGCAGGGGTACCAGGGAGAAAACAAAGGGTTTCTAGTTTGCAAGAAGAAGATGGGAACATCTCCAGAAAGCCTATGTTGCTTCTGCCCTCTTCCTTTTAAAGAGTTTGTTGAACATGTTGTGAACTTGAAGTTTGATGAAGATCCCAACTATGCAAAATATATTTCTCTATTTGATGGAATTGTTGGTCCAAATCCAGATATAAGGCCAATTAATACAGAAGGTGCACAAAAGCTCATCGGTCATAAGAGAGGTCGTTTGgctatggaagaagaagatgatgaacaGCCAAAAAAGAAGATCCGTATGGGTATGCCAGCAACACAATGGATAAGTGTTTACAATGCCCGCAGACCAATGAAACAAAGCTGTTGCAATGAGACATTGCAAGCTTCCCCTCCCCTTAACGTTAAGGGTGGAGGGGGAGATTCTTATACATGTGCTGTCTGTGAATCTGCCTACCCTCCTACTCTCTATTTGTTATATCACTATAATGTAGCAGATACAAGGTTATCCCAGCACATTGAGAAAGGAAATGAGGATGGCTTATATATTAGCAGTGTGGCTTCATCTCAGAACCTGTGGGCCTTAATCATGGACGCAGGCACTGGTTTCACTGCCCAAGTTTATGAACTCTCCCCCTATTTTCTCCACAAGGAATGGATAATGGAGCAATGGGAAAAGAATTACTATATCAGTGCAATAGCCGGAGCTACAAATGGAAGTTCATTAGTAGTGATGTCTAAGGGCACTCAGTTTGTGCAGCAATCCTACAAAGTCAGTGATTCATTTCCATTCAAGTGGATTAACAAAAAATGGAGGGAGGGCTTTTATGTTACGGCAATGGCCACCGCAGGTAGCAGATGGGGGGTAGTTATGTCTCGTGGTGCAGGATTTTCTGACCAGGTGGTTGAACTGGATTTTCTTTATCCAAGTGAAGGGATTCACAAGCGCTGGGATTACGGATATCGGATCACTGCAACTGCGGCAACGTGGGATCAAGCTGCATTTGTCCTCAGTGTGCCTCGGAGGAAACCTGCAGATGAAACACAAGAAACACTCAGAACATCATCTTTTCCTAGTGTACATGTCAAGGAGAAGTGGGCAAAGAACCTGTATATAGCATCTATTTGCTATGGACGAACAGTTTCTTGA 2229 0.4549 MPVLRSGVRRGRAAVKKQRREPLDKVLIGEEEGIATRTRRRRAAAAAAAVPKTNEQRKQVVDENVAVPAKEEEQKSLDEAVRVGEGEAAAGGAEREEVGEKQMDDYGSGGRSNDKGNAGEDEGSTAPIPEKVQVGGSPMYKVDRKLGKGGFGQVYVGRRVSAVNMNERTGSGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHYKGKQGEYYVMVMDMLGPSLWDVWNNNSHSMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDNTTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPESLCCFCPLPFKEFVEHVVNLKFDEDPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKIRMGMPATQWISVYNARRPMKQSCCNETLQASPPLNVKGGGGDSYTCAVCESAYPPTLYLLYHYNVADTRLSQHIEKGNEDGLYISSVASSQNLWALIMDAGTGFTAQVYELSPYFLHKEWIMEQWEKNYYISAIAGATNGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDYGYRITATAATWDQAAFVLSVPRRKPADETQETLRTSSFPSVHVKEKWAKNLYIASICYGRTVS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0301 742 PANTHER - 516 716 - -
Sto1g0301 742 PANTHER - 99 478 - -
Sto1g0301 742 ProSitePatterns Protein kinases ATP-binding region signature. 146 179 IPR017441 GO:0005524
Sto1g0301 742 SMART serkin_6 140 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0301 742 SUPERFAMILY Protein kinase-like (PK-like) 140 420 IPR011009 -
Sto1g0301 742 Gene3D Transferase(Phosphotransferase) domain 1 110 462 - -
Sto1g0301 742 MobiDBLite consensus disorder prediction 45 137 - -
Sto1g0301 742 MobiDBLite consensus disorder prediction 89 108 - -
Sto1g0301 742 Pfam Protein kinase domain 140 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0301 742 MobiDBLite consensus disorder prediction 56 82 - -
Sto1g0301 742 MobiDBLite consensus disorder prediction 1 20 - -
Sto1g0301 742 PANTHER CASEIN KINASE-RELATED 516 716 - -
Sto1g0301 742 PANTHER CASEIN KINASE-RELATED 99 478 - -
Sto1g0301 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Sto1g0301 742 CDD STKc_CK1 139 416 - -
Sto1g0301 742 ProSiteProfiles Protein kinase domain profile. 140 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0301 Sto-Chr1 2285914 2291199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0301 107 374 AGC Kinase Gene Family AT3G08720 22.300 2.98e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Sto1g0301 Pkinase 7.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0301 - - zju:107435330 1197.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0283 9 2666791 2672239 Sto1g0301 1 2285914 2291199 ECH
Sto1g0301 1 2285914 2291199 Sto1g0301 1 2285914 2291199 ECH