Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0290 ATGGCTTCGTCTTGTTCATCATGTCTTGTGCGAATTGTGTGTGGTTTTATGGTAATTTCCATGGCTTGTGGTTGGCAATTCAAAGTGGGTGATGAGTTTGGTTGGCAAAAACCTGCCCTTAATCAAACTTCTTTCTATAGCCAATGGGCTGAAATATTCGAGTACAGGAATGACTCTGTCCTGACAGTGGAGAAGTGGGATTACTATCACTGTGATGGAAGTGATCCAATCACAGCCTTTGACAATGGGAAGAGTATCATTAATCTGGATAGGCccggcttcttcttcttcatcagtgGGTCCCACGACCATTGCATCAACGGCCAGAGATTGATCGTCGACGTCATGTCCCCACACCCCGCTGCATCTCCACCGTCCATTATTATTGCTCCTTCACCTGATGATGATCAAGAAGCTTCTTCTTCACCATCACCTTCATCTTCTAATtccattgatgatgatgatgatgataatcaTAATATCTCAAACTCAGCAATTTCATTATCATCATCCTCCTCTATGCTTCTTCTGGCCACTTCTCTTGTGTTATTGTACTCATTTGTTAATTAG 570 0.3895 MASSCSSCLVRIVCGFMVISMACGWQFKVGDEFGWQKPALNQTSFYSQWAEIFEYRNDSVLTVEKWDYYHCDGSDPITAFDNGKSIINLDRPGFFFFISGSHDHCINGQRLIVDVMSPHPAASPPSIIIAPSPDDDQEASSSPSPSSSNSIDDDDDDNHNISNSAISLSSSSSMLLLATSLVLLYSFVN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0290 189 Gene3D - 25 125 IPR008972 -
Sto1g0290 189 Pfam Plastocyanin-like domain 52 109 IPR003245 GO:0009055
Sto1g0290 189 PANTHER BLUE COPPER PROTEIN 14 185 IPR039391 GO:0009055
Sto1g0290 189 MobiDBLite consensus disorder prediction 135 149 - -
Sto1g0290 189 PANTHER EARLY NODULIN-LIKE PROTEIN 2 14 185 - -
Sto1g0290 189 ProSiteProfiles Phytocyanin domain profile. 25 117 IPR003245 GO:0009055
Sto1g0290 189 MobiDBLite consensus disorder prediction 124 158 - -
Sto1g0290 189 SUPERFAMILY Cupredoxins 24 116 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0290 Sto-Chr1 2217591 2219136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0290 3 127 Phytocyanin Superfamily AT1G79800 50.704 1.40e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0290 - - ath:AT1G79800 140.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0290 1 2217591 2219136 Sto1g0290 1 2217591 2219136 ECH