Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0250 ATGCTAGCAATGGACTATAACATGTATGGAGGAGGAGGGCAGGGAACCAGAATGCTTAGGAATGGGCAGAGGAGCTTCAATGGAATGAATGAGTACTATATGGAGCCCTCCACGCCTCCTGGAAATCATCGGGCTTCTAGTCAGAAAAGAACGCGGAAGATTCACCCGATGCCAGTGTCCAATGTATATGATGGTGCTTCCATGTATCAGCCTGTCCAGGGTAACAGCTTTGATGATTCAGAACCTTACATTTCTGGAAAACAGACCAGTAGAGCTCGTGTTCCTGAAAACAATCTCCTCAAAATTTTCATAGAGCTTATTGATAATGGTATGGTATTGGTTGACCTAACTCAGTATGTAGAGAAGCACGAATTTGTTTTTGATGCAGTCTTGAATGAAGAGGTCACAAATGATGAGGTGTATCATGAAACAGTGGAGCCCATAGTTCCAATAATCTTTCAACGCACCAAGGCAACTTGCTTTGCATATGGGCAAACAGGAAGTGGAAAAACTTATACAATGAAGCCGCTGCCACTTAAAGCATCAAGGGACATCTTAAGATTAATGTACCATACTTACAGGAACCAGGGATTTCAGTTGTTTGTGagtttttttgaaatatatggCGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAGCTTTGCATGAGGGAGGACGGAAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACAGAGTAGCAGATGTAGAGACCATCAAGGAATTGATTGAGAAAGGAAGCTCCACAAGAAGTACAGGCACCACTGGTGCAAATGAGGAATCTTCACGGTCACATGCAATACTGCAGCTTGCTATCAAGAGGTCAGCTGACGGCAATGAATCCAAGCCTCCGCGTCTTGTTGGCAAGCTCTCCTTCATAGATCTTGCAGGAAGTGAACGTGGGGCTGACACCACTGATAATGACAAACAGACAAGGGTGAAAAGCTTATCAAAAGGTAACAACCCTAAGAAGGATGTTTTATCTTcaaatttcaatctcaaagaatCAACTACCATTCCCTTATCTTCGGTTACTACATCAACCTTTGAGGATCGCACAGCCGATGCATGGCCTGAGGAAGATGATGGAGATGAATTTAGTCCATCTGAGGAGTACTGTGAACAGGTAAAACCATCCTGGAAGAAAAATGGAAAGATGGAGCCATTTGGTACCACAGATAACAAATTTAAGAAACCCAACAGTCAGATCAAATGGAAAGACATTCCAAAAGTTGAACCTAAAGTTGCAAattctgatgatgatgatttaaATGCCCTCTTACAGGAAGAGGAAGAGCTTGTAAATGCTCACCGGAAACAAGTAGAGGAGACTATGAATATTGTGAAAGAGGAGATGAACCTCTTGGTGGAAGCAGATCAACCAGGGAATCAGCTAGATGATTATATAACCAGACTAAATGCCATTCTATCTCAGAAGGCTTCTGCCATCCTTCAGTTACAAACCCGTTTAGCTCATTTCCAGAAAACGTTTAAAGGATCATAA 1530 0.4118 MLAMDYNMYGGGGQGTRMLRNGQRSFNGMNEYYMEPSTPPGNHRASSQKRTRKIHPMPVSNVYDGASMYQPVQGNSFDDSEPYISGKQTSRARVPENNLLKIFIELIDNGMVLVDLTQYVEKHEFVFDAVLNEEVTNDEVYHETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMYHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVADVETIKELIEKGSSTRSTGTTGANEESSRSHAILQLAIKRSADGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRVKSLSKGNNPKKDVLSSNFNLKESTTIPLSSVTTSTFEDRTADAWPEEDDGDEFSPSEEYCEQVKPSWKKNGKMEPFGTTDNKFKKPNSQIKWKDIPKVEPKVANSDDDDLNALLQEEEELVNAHRKQVEETMNIVKEEMNLLVEADQPGNQLDDYITRLNAILSQKASAILQLQTRLAHFQKTFKGS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0250 509 MobiDBLite consensus disorder prediction 323 340 - -
Sto1g0250 509 ProSiteProfiles Kinesin motor domain profile. 85 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0250 509 PRINTS Kinesin heavy chain signature 155 176 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0250 509 PRINTS Kinesin heavy chain signature 264 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0250 509 PRINTS Kinesin heavy chain signature 298 316 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0250 509 MobiDBLite consensus disorder prediction 354 378 - -
Sto1g0250 509 MobiDBLite consensus disorder prediction 254 273 - -
Sto1g0250 509 Coils Coil 436 467 - -
Sto1g0250 509 Pfam Kinesin motor domain 117 320 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0250 509 MobiDBLite consensus disorder prediction 308 340 - -
Sto1g0250 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 322 IPR027417 -
Sto1g0250 509 SMART kinesin_4 85 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0250 509 MobiDBLite consensus disorder prediction 364 378 - -
Sto1g0250 509 ProSitePatterns Kinesin motor domain signature. 297 308 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sto1g0250 509 PANTHER KINESIN-LIKE PROTEIN KIN-13B 112 322 - -
Sto1g0250 509 PANTHER KINESIN-LIKE PROTEIN KIN-13B 4 103 - -
Sto1g0250 509 PANTHER KINESIN-LIKE PROTEIN KIN-13B 321 507 - -
Sto1g0250 509 PANTHER KINESIN-RELATED PROTEIN 6 112 322 - -
Sto1g0250 509 PANTHER KINESIN-RELATED PROTEIN 6 4 103 - -
Sto1g0250 509 PANTHER KINESIN-RELATED PROTEIN 6 321 507 - -
Sto1g0250 509 Gene3D Kinesin motor domain 84 348 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0250 Sto-Chr1 1877791 1882128 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0250 121 309 Calmodulin-binding Proteins AT5G65930 33.166 4.87e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0250 K10393 - gmx:100799100 693.345