Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0249 ATGTCTGCGCCGTCTCCGGATGTATCTCAGACAGCTCCCGATACCAACGTcacctctcctcctcctccgccgCCTGCCACCACCAATGATATCTCTTCTCCGCCGCCGACCTCCTCTGCCGTTCCCAAAGGAAAGCGGAGAAGGATGAGACAACATGGGTTTGATAATTACTCTACTGCTACTCCACAACCGCCGAAAGTTTGGTGGTCTACCCCAGCATTGGCAACAAACTACTCTTCCTCCTACAGATGGTGGTGCTACATTGCTTCCAAAGCCAACCCCCCCCCTGGAGTTGGATTGAATCAGCAACAGTCGGCCATTAACGTTCCGTCTCCCCCTATGCATTCTATGACTAGCACAAGTTTGGAATCTGAGAGACCAGATAATGCATCATCTCCTGCCATTGCCTTGGGACTCTTACAAATCTCATTTACATATGATGAGTTAGCATTTGCAACAAATGGATTCTCAAACTCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTCCATAAAGGAGTCCTCCCAAATGGAAAAACAGTTGCAATTAAGCAGATGAAATCTGGGAGCAGACAGGGGGAGCGTGAGTTTCAGGCTGAAGTTGAGATCATTAGCCGAGTACATCACAGACATCTTGTTTCCCTAGTTGGATACTGCATTGCTGGAGACCAGAGGttgcttgtttatgagtttGTCCCAAATAATACACTAGAGTTCCATTTGCATGGAAAAGACAGAGAAATTATGGACTGGGCTACAAGGATGAAAATTGCTATTGGATCTGCAAAAGGATTGGCATATCTGCATGAGGACTGGTTGAGTACTACTGATATAGTGCGAGGGCTCGCTCGATCGTGTTGTGGAACTTGTTTGAGGGAAAGAAAGGCGAACGGAGATGAACGGAGTAGCGAGACAGGGGCAGAGATCTGGTGCGACGGGGTGCATCACCAGCGTCAATACTCCGATAACTTCTTCGACGGCTCGTCCAATGGGAGGTGCTTCCAATCGGCTGGTCTCCAACACTTGCAAACCTCTGGAAATTCCATTCCTCCACTTCAGGTTTTGATCTTCACCATATTTCTGTCTGCAGGCCCCATAGCATTTTTGAAAATGCAGGATAAAAACTAG 1128 0.4583 MSAPSPDVSQTAPDTNVTSPPPPPPATTNDISSPPPTSSAVPKGKRRRMRQHGFDNYSTATPQPPKVWWSTPALATNYSSSYRWWCYIASKANPPPGVGLNQQQSAINVPSPPMHSMTSTSLESERPDNASSPAIALGLLQISFTYDELAFATNGFSNSNLLGQGGFGYVHKGVLPNGKTVAIKQMKSGSRQGEREFQAEVEIISRVHHRHLVSLVGYCIAGDQRLLVYEFVPNNTLEFHLHGKDREIMDWATRMKIAIGSAKGLAYLHEDWLSTTDIVRGLARSCCGTCLRERKANGDERSSETGAEIWCDGVHHQRQYSDNFFDGSSNGRCFQSAGLQHLQTSGNSIPPLQVLIFTIFLSAGPIAFLKMQDKN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0249 375 ProSitePatterns Protein kinases ATP-binding region signature. 162 184 IPR017441 GO:0005524
Sto1g0249 375 Gene3D Transferase(Phosphotransferase) domain 1 233 281 - -
Sto1g0249 375 MobiDBLite consensus disorder prediction 1 48 - -
Sto1g0249 375 ProSiteProfiles Protein kinase domain profile. 156 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0249 375 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 110 271 - -
Sto1g0249 375 SUPERFAMILY Protein kinase-like (PK-like) 137 272 IPR011009 -
Sto1g0249 375 MobiDBLite consensus disorder prediction 1 15 - -
Sto1g0249 375 Gene3D Phosphorylase Kinase; domain 1 117 231 - -
Sto1g0249 375 MobiDBLite consensus disorder prediction 16 31 - -
Sto1g0249 375 Pfam Protein tyrosine and serine/threonine kinase 159 271 IPR001245 GO:0004672|GO:0006468
Sto1g0249 375 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 110 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0249 Sto-Chr1 1872463 1877666 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0249 99 271 Trihelix Transcription Factor Family AT4G32710 59.538 1.56e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Sto1g0249 PK_Tyr_Ser-Thr 4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0249 - - jre:109012256 287.73