Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0246 ATGTTCCGCAGGGGAAGGGGACAGGGAGGTTTTGGTAAGAGGAGGAACAAGACACATACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTTCATCTCCAGAAGAGTCGCTGCTCCGCCTGTGCTTTCCCTGCTGCCCGCAAGAGGAAGTACAATTGGAGTGTCAAGGCCATCCGTAGAAAGACCACCGGAACTGGTAGGATGAGGTACTTGCGTAATGTGCCTCGCAGATTCAAGAGTGGCTTCAGAGAAGGCACGGAAGCTGCACCCAGGAAGAAGGGAGCAGCTGCTGCCTCTGCATAA 300 0.5533 MFRRGRGQGGFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAAAASA 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0246 99 Pfam Ribosomal protein L37e 6 56 IPR001569 GO:0003735|GO:0005840|GO:0006412
Sto1g0246 99 PANTHER RIBOSOMAL PROTEIN L37 5 97 - -
Sto1g0246 99 SUPERFAMILY Zn-binding ribosomal proteins 6 58 IPR011332 GO:0006412
Sto1g0246 99 PANTHER 60S RIBOSOMAL PROTEIN L37 5 97 - -
Sto1g0246 99 MobiDBLite consensus disorder prediction 80 99 - -
Sto1g0246 99 Gene3D - 5 90 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0246 Sto-Chr1 1852684 1853656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0246 6 98 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 84.946 1.28e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0246 K02922 - csin:114313741 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0246 1 1852684 1853656 Sto1g0246 1 1852684 1853656 ECH