Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0244 ATGAACGGAGTAGCGAGACAGGGGCAGAGATCTGGTGCGACGGGGGTGCATCACCAGCGTCAATACTCCGATAACTTCTTCGACGGCTCGTCCAATGGGAGGTGGCTCCAATCGGCTGGTCTCCAACACTTGCAAACCTCTGGAAATTCCATTCCTCCACTTCAGGACTATAACATGTATGGAGGAGGAGGGCAGGGAACCAGAATGCTTAGGAATGGGCAGAGGAGCTTCAATGGAATGAATGAGTACTATATGGAGCCCTCCACGCCTCCTGGAAATCATCGGGCTTCTAGTCAGAAAAAGAACGCGGAAGATTCACCCGGTGATTTCAGCCCTGGGCTGTTGGATCTGCATTCATTTGATACGGAGCTTATTCCTGAAATGCCAGTGTCCAATGTATATGATGGTGCTTCCATGTATCAGCCTGTCCAGGGTAACAGCTTTGATGATTCAGAACCTTACATTTCTGGAAAACAGACCAGTAGAGCTCGTGTTCCTGAAAACAATCTCCTCAAAAGTTTTTCTGTTGACAAAGAGAAATCTAATTCTGTTGCAAAAATTAAAGTTGTGGTTCGCAAAAGGCCACTTAATAAAAAGGAATTAGCGAAAAGTGAGGAAGATATTATAGATACTCATTCCAATTCTTTAACAGTGCATGAGACTAAACTTAAGGTGAGTTCAATAGTTGACCTAACTCAGTATGTAGAGAAGCACGAATTTGTTTTTGATGCAGTCTTGAATGAAGAGGTCACAAATGATGAGGTGTATCATGAAACAGTGGAGCCCATAGTTCCAATAATCTTTCAACGCACCAAGGCAACTTGCTTTGCATATGGGCAAACAGttatatataaaataagctTAATAGTTCTCTTTTCTGCTTTTCTAGGAAGTGGAAAAACTTATACAATGAAGCCGCTGCCACTTAAAGCATCAAGGGACATCTTAAGATTAATGTACCATACTTACAGGAACCAGGGATTTCAGTTGTTTGTGagtttttttgaaatatatggCGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAGCTTTGCATGAGGGAGGACGGAAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACAGAGTAGCAGATGTAGAGACCATCAAGGAATTGATTGAGAAAGGAAGCTCCACAAGAAGTACAGGCACCACTGGTGCAAATGAGGAATCTTCACGGTCACATGCAATACTGCAGCTTGCTATCAAGAGGTCAGCTGACGGCAATGAATCCAAGCCTCCGCGTCTTGTTGGCAAGCTCTCCTTCATAGATCTTGCAGGAAGTGAACGTGGGGCTGACACCACTGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAATAAGAGTTTACTGGCCCTAAAAGAATGCATAAGAGCCCTTGATAATGACCAAGGCCACATCCCTTTCCGAGGCAGTAAATTGACTGAAGTTTTGAGGGATTCATTTGTTGGTAACTCCCGGACTGTTATGATTTCATGCATATCACCAAGCTCTGGTTCATGTGAACATACTCTTAATACATTAAGATACGCTGACAGGGTGAAAAGCTTATCAAAAGGTAACAACCCTAAGAAGGATGTTTTATCTTcaaatttcaatctcaaagaatCAACTACCATTCCCTTATCTTCGGTTACTACATCAACCTTTGAGGATCGCACAGCCGATGCATGGCCTGAGGAAGATGATGGAGATGAATTTAGTCCATCTGAGGAGTACTGTGAACAGGTAAAACCATCCTGGAAGAAAAATGGAAAGATGGAGCCATTTGGTACCACAGATAACAAATTTAAGAAACCCAACAGTCAGATCAAATGGAAAGACATTCCAAAAGTTGAACCTAAAGTTGCAAattctgatgatgatgatttaaATGCCCTCTTACAGGAAGAGGAAGAGCTTGTAAATGCTCACCGGAAACAAGTAGAGGAGACTATGAATATTGTGAAAGAGGAGATGAACCTCTTGGTGGAAGCAGATCAACCAGGGAATCAGCTAGATGATTATATAACCAGACTAAATGCCATTCTATCTCAGAAGGCTTCTGCCATCCTTCAGTTACAAACCCGTTTAGCTCATTTCCAGAAACGTTTAAAGGATCATAACGTGTTGGTTTCATCTGCTGGCTACTAA 2166 0.4132 MNGVARQGQRSGATGVHHQRQYSDNFFDGSSNGRWLQSAGLQHLQTSGNSIPPLQDYNMYGGGGQGTRMLRNGQRSFNGMNEYYMEPSTPPGNHRASSQKKNAEDSPGDFSPGLLDLHSFDTELIPEMPVSNVYDGASMYQPVQGNSFDDSEPYISGKQTSRARVPENNLLKSFSVDKEKSNSVAKIKVVVRKRPLNKKELAKSEEDIIDTHSNSLTVHETKLKVSSIVDLTQYVEKHEFVFDAVLNEEVTNDEVYHETVEPIVPIIFQRTKATCFAYGQTVIYKISLIVLFSAFLGSGKTYTMKPLPLKASRDILRLMYHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVADVETIKELIEKGSSTRSTGTTGANEESSRSHAILQLAIKRSADGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNPKKDVLSSNFNLKESTTIPLSSVTTSTFEDRTADAWPEEDDGDEFSPSEEYCEQVKPSWKKNGKMEPFGTTDNKFKKPNSQIKWKDIPKVEPKVANSDDDDLNALLQEEEELVNAHRKQVEETMNIVKEEMNLLVEADQPGNQLDDYITRLNAILSQKASAILQLQTRLAHFQKRLKDHNVLVSSAGY 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0244 721 ProSiteProfiles Kinesin motor domain profile. 186 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0244 721 MobiDBLite consensus disorder prediction 1 25 - -
Sto1g0244 721 Gene3D Kinesin motor domain 165 531 IPR036961 -
Sto1g0244 721 MobiDBLite consensus disorder prediction 82 109 - -
Sto1g0244 721 Coils Coil 639 670 - -
Sto1g0244 721 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 721 - -
Sto1g0244 721 ProSitePatterns Kinesin motor domain signature. 427 438 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sto1g0244 721 PANTHER KINESIN-RELATED PROTEIN 6 1 721 - -
Sto1g0244 721 Pfam Kinesin motor domain 192 527 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0244 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 528 IPR027417 -
Sto1g0244 721 CDD KISc_KIF2_like 186 526 - -
Sto1g0244 721 MobiDBLite consensus disorder prediction 384 403 - -
Sto1g0244 721 PRINTS Kinesin heavy chain signature 285 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0244 721 PRINTS Kinesin heavy chain signature 394 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0244 721 PRINTS Kinesin heavy chain signature 428 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0244 721 PRINTS Kinesin heavy chain signature 478 499 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto1g0244 721 SMART kinesin_4 184 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0244 Sto-Chr1 1830747 1835477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0244 185 540 Calmodulin-binding Proteins AT5G65930 32.240 1.46e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0244 K10393 - gmx:100799100 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0244 1 1830747 1835477 Sto1g0244 1 1830747 1835477 ECH