Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0242 ATGGATTGGTGGGTTGGAAATAGTTGGGGTAGAGAATTTGTGGCGGGAGGAATTGGGGGTGTGGCTGGTGTAATATCTGGTTATCCATTGGATACAATCCGAATCCTCCAACAGAATTCAAATAATATGCGTTCTGCTTTCAGCTTAATCAGAAATGTTGTGTCCAAGGAAGGACCAACTGCCCTCTACAGAGGCATGGCTGCACCTTTAGCCTCTGTTGCTtttcagAATGCTATGGTTTTCCAAACCTACGCAGTTCTCTCAAGATCTTTTGACTCATCAGTTTCACCAAAGGACCCTCCCTCTTACAAGGGTGTTGCTCTAGGAGGATTCATTACAGGTGTTGCACAAAGCACAATTGTGTCTCCAGTAGAGTTGGTCAAAATTCGCCTTCAGTTGCAGAACAAAGGCCAATCGAAAGAATCATGTAAAGGACCATTATTAATCACTAGGAACATATGGAAAGCAGAAGGTCTTCGAGGCATATTTAGAGGATTTGGCATCACTGTTCTCAGAGATGCACCAAGTCATGGGATCTACTTCTGGACATATGAATACGTGAGGGAACAACTTCACCCTGGATGCAGAAGAATTGGCAAAGAAAGCTTGTGGACTATGTTAACTGCAGGAGGATTAGCTGGAGTAGTAAGTTGGATAGGTTCCTACCCTTTGGATGTTATAAAGACAAGGCTTCAGGCTCAGACACCATCTTCAATGAAATACAAAAGCATGCTTGATTGCGTCAGACAGAGCATTAGAGAAGAAGGGTACGATGTGTTATGGAGAGGTCTGGGTACTACTGTTGGTAGAGCTTTTGTAGTGAATGGTGCTGTGTTTGCTGGTTATGAGATTGCTATGAGGAGCCTGTCTAACAATGGAAGTAATAACAATCTAGAAGAACCATCCTTTTCCAGGAATACAGGACAAAGGGACAGAACATCCTAA 945 0.4307 MDWWVGNSWGREFVAGGIGGVAGVISGYPLDTIRILQQNSNNMRSAFSLIRNVVSKEGPTALYRGMAAPLASVAFQNAMVFQTYAVLSRSFDSSVSPKDPPSYKGVALGGFITGVAQSTIVSPVELVKIRLQLQNKGQSKESCKGPLLITRNIWKAEGLRGIFRGFGITVLRDAPSHGIYFWTYEYVREQLHPGCRRIGKESLWTMLTAGGLAGVVSWIGSYPLDVIKTRLQAQTPSSMKYKSMLDCVRQSIREEGYDVLWRGLGTTVGRAFVVNGAVFAGYEIAMRSLSNNGSNNNLEEPSFSRNTGQRDRTS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0242 314 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 5 290 - -
Sto1g0242 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 288 IPR018108 -
Sto1g0242 314 SUPERFAMILY Mitochondrial carrier 8 283 IPR023395 -
Sto1g0242 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 101 190 IPR018108 -
Sto1g0242 314 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 290 - -
Sto1g0242 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 7 90 IPR018108 -
Sto1g0242 314 Pfam Mitochondrial carrier protein 8 91 IPR018108 -
Sto1g0242 314 Pfam Mitochondrial carrier protein 201 292 IPR018108 -
Sto1g0242 314 Pfam Mitochondrial carrier protein 108 191 IPR018108 -
Sto1g0242 314 PRINTS Mitochondrial carrier protein signature 12 25 IPR002067 GO:0055085
Sto1g0242 314 PRINTS Mitochondrial carrier protein signature 25 39 IPR002067 GO:0055085
Sto1g0242 314 PRINTS Mitochondrial carrier protein signature 116 134 IPR002067 GO:0055085
Sto1g0242 314 PRINTS Mitochondrial carrier protein signature 163 181 IPR002067 GO:0055085
Sto1g0242 314 PRINTS Mitochondrial carrier protein signature 210 232 IPR002067 GO:0055085
Sto1g0242 314 MobiDBLite consensus disorder prediction 291 314 - -
Sto1g0242 314 Gene3D Mitochondrial carrier domain 10 303 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0242 Sto-Chr1 1823639 1825641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0242 1 298 Antiporters AT1G79900 62.458 5.40e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0242 K15109 - gmx:100812056 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0242 1 1823639 1825641 Sto1g0242 1 1823639 1825641 ECH