Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0229 ATGCCTAATAAGCTTCAAGTTTTCCTTCATTATTACCTCTCAAAGCTCAAAAACTGTCGTCCCCAAATCCAATCGTCTTCTCCAAAAAACTGGATTCTCTCGGGTTGCAAGAAACCCAAGACTCCTTCCTTCGCCATAGCCAGAAGAAACGACGACGCAGCGACCTTATCGGACATTGATCGCTTCCTCTTCGAGAATTTCAAGTCTCTATTCAACAATGACGATAGCAATAGCACCACTAGGGTTCCTGATCAAGAAAACCACGAGGCTCCGAAATTAGGATCCATCACGCTCGATTCGACCCGCTTTATCGACCCGGAATTGCTGGATAATCCCGATGGATGTGAGAGCATCGCGGTGTTGACGCGATCGGCGAGGCCGTTCGAGGAATTCCGGCGATCGATGAGGGAAATGGTGGAAGCGAGAATGAGGAGTTACGAGAGGGTGGATTGGGGATTTATGGAGGAGTTATTGTTTTGTTATTTGAATGTGAACGAGAAGAAGTCGTATAGGTTTATACTGATTGCTTTCGTGGATTTGGTCAACTTTTACGGCGACGGTCATCTGAGAGAGCTCCGGCGACGGCGAAGCCACGGAGTGTTCGAACGATATTCTTCTTGGCTGGCTGACCAAAATCTGAACAATCAATTCAATTTTGCAACGATGAGCGTAGTTGGTTTTGATTTTGGTAACGAGAGTTGTATTGTTGCTGTTGCGAGGCAGAGGGGAATTGATGTTGTGCTCAATGATGTGTCCAAGCGAGAAACACCTGCAATTGTATGA 783 0.4649 MPNKLQVFLHYYLSKLKNCRPQIQSSSPKNWILSGCKKPKTPSFAIARRNDDAATLSDIDRFLFENFKSLFNNDDSNSTTRVPDQENHEAPKLGSITLDSTRFIDPELLDNPDGCESIAVLTRSARPFEEFRRSMREMVEARMRSYERVDWGFMEELLFCYLNVNEKKSYRFILIAFVDLVNFYGDGHLRELRRRRSHGVFERYSSWLADQNLNNQFNFATMSVVGFDFGNESCIVAVARQRGIDVVLNDVSKRETPAIV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0229 260 SUPERFAMILY Actin-like ATPase domain 222 260 IPR043129 -
Sto1g0229 260 ProSiteProfiles OVATE domain profile. 120 183 IPR006458 -
Sto1g0229 260 Pfam Transcriptional repressor, ovate 124 181 IPR006458 -
Sto1g0229 260 Pfam Hsp70 protein 224 260 IPR013126 GO:0005524|GO:0140662
Sto1g0229 260 Gene3D - 211 260 - -
Sto1g0229 260 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 94 - -
Sto1g0229 260 PANTHER TRANSCRIPTION REPRESSOR OFP14 113 192 - -
Sto1g0229 260 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 118 181 IPR006458 -
Sto1g0229 260 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 94 IPR038933 GO:0045892
Sto1g0229 260 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 113 192 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0229 Sto-Chr1 1730313 1731735 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto1g0229 Ovate 4.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0229 - - csv:105436201 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0229 1 1730313 1731735 Sto1g0229 1 1730313 1731735 ECH