Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0211 ATGTCATCGGTGACTACTACTGGCACCCAATACGACGTCGTTGAGTTGAACCTCGGGCTTGCTCTTCCCGGCTCCAAACGTGGCTTCTCCTCAGAAACCAATAATACTACTTTTGATTCAACCTCTTCCTCTCATAATTCACCTCCACACAAGATACAAGCGGTGGGGTGGCCGCCGGTGAGGGCGAGTAGGAAGAACGTGAAGAGGAGGTGCAAGTACGTGAAGGTGGCGGTGGACGGAGCTCCATATCTGAGGAAGGTGGATCTTGAGACGTACGAGAGCTATGATCAGCTACTCACGGGATTAGAGACCATGTTTTGTTGCTTGACAGTTGGTAATCATTTGAATGAGAGGAAGTTGATGGACCTTGGGAATGGGGCGGAATACGTACCCACCTATGAGGACAGAGATGGTGACTGGATGCTTGCTGGGGATGTACCCTGGAAGATGTTTGTTGAGTCATGCAAACGAATAAGGTTAATGATAAAGTCAGAGGCAACTGGCTTAGTTTGTTTGCACTGTGTTGCTGCTGTTGCTGCTATGAGAGTTGCGAGTGCTGCTTGGATTCTTGTTGCTGCTGCAGCTAATTACTGTAAAGACGACGACGTTTCGTTTCGTTTTAATTTGTCTTTCCGAaggtga 642 0.4782 MSSVTTTGTQYDVVELNLGLALPGSKRGFSSETNNTTFDSTSSSHNSPPHKIQAVGWPPVRASRKNVKRRCKYVKVAVDGAPYLRKVDLETYESYDQLLTGLETMFCCLTVGNHLNERKLMDLGNGAEYVPTYEDRDGDWMLAGDVPWKMFVESCKRIRLMIKSEATGLVCLHCVAAVAAMRVASAAWILVAAAANYCKDDDVSFRFNLSFRR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0211 213 SUPERFAMILY CAD & PB1 domains 69 162 - -
Sto1g0211 213 MobiDBLite consensus disorder prediction 27 50 - -
Sto1g0211 213 ProSiteProfiles PB1 domain profile. 71 165 IPR000270 GO:0005515
Sto1g0211 213 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 9 167 IPR003311 GO:0005634|GO:0006355
Sto1g0211 213 Pfam AUX/IAA family 25 67 IPR033389 -
Sto1g0211 213 Pfam AUX/IAA family 69 169 IPR033389 -
Sto1g0211 213 PANTHER AUXIN-RESPONSIVE PROTEIN IAA15 9 167 - -
Sto1g0211 213 MobiDBLite consensus disorder prediction 27 54 - -
Sto1g0211 213 Gene3D - 65 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0211 Sto-Chr1 1561707 1566183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0211 16 169 B3 DNA Binding Superfamily AT4G23980 26.994 1.25e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sto1g0211 AUX_IAA 7.4e-50 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0211 K14484 - sind:105164666 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0211 1 1561707 1566183 Sto1g0211 1 1561707 1566183 ECH