Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0167 ATGGATCATTTGAGTGTCTTCTCCCTCTCACTCTTGATCGCGTCACCCGCCGATATCACCAGTCGCGATTTACTCTCGCTCAAACCCAGAGAGGTGATAGCCATGAGCAGAATCCTCTTTTTGAAGAATCTCTTTATTTTCTCGgcttcttttgcttcttcttcttcctcctcctcctcatcatcatTTCGTCGGCTTCTTCAAGTTTCTCACTTTGCAACCTCATCTAGTTACCCTTTGTCGGGGAGACGCCATGAAGAGGAATCCCGAAATGTGCCGGTTTCAGTATGGTGGGATTTCGAGAACTGCAATTTACCTGTTGATGTCAATATTTACAGAATTGCCCACTGCATAACTGAGGCTGTCAGGGCAAAAGGGATAAAGGGGCCTATTCAAATTACGGCTTTTGGTGATGTTTTCCAACTCACAAGGGCGAAACAGGAGGCTCTCTCTTCGACTGGGATTACTCTCACCCACATTCCCAATGGTGGAAAGAATAGTGCTGATAGATCCCTTCTTGTTGACCTTATGTACTGGGTTTCCCAAAACCCTCCACCAGCACATTTGTTTCTGATCTCCGGTGATAGGGATTTTGCTGGAATATTACATCGTTTAAGGATGAATAACTATAATATATTGCTTGCAAGTCCAGAAGATAGGTCTCCTAGTGTTCTCTGCAGTGCAGCAACTATAATGTGGCACTGGAATACATTGCTTAAAGGAAAAGATCTTTCTGGAAAACACTTCAACCATCCTCCTGATGGTCCTTTTGCTTCTTGGTATGGGCACCACAAGGTACCTCTGGAAGACCCATTCCCAATTGATGAGCAGTCTACATGTTTACAAACTGAGGATAACTCTGAGTTACGCCCACCTCCTAAGGCAATTACAAGGCATATTCGACATGTATTGTATTCGTATCCAAAAGGCATCTCTTTATCAGAACTTCGAGTAGAGTTGTCTAAAGCAGATATTCACTTGGATAAAGACTACTATGGACATAGAAAGTTTTCTCGCTTTCTTCTTTCAGTGgcaaatataaagttttggatTGGACCTGATAAACAGCTTTTCGTAGCACCCCAAAAAATTCCTGAATCCTATTGTAGAGGTCTTGTAGCAACAACATCATCTGTTGATAATGAGGAGTTGAACTTTGTGGCTACTTCTAAGTTAAGCGGTGAGGGGGAAAGTGTGGTTAAGGATGCAGCTGGAACACCACTAATGGCCTCATCTAATGATTTTGGTGTAGAAGATGTTCCAGAAAAGGCCCAACAGGTTGAGGATGTGGTCAATGCTCAAGTGACTGAGAATCGATTGCCAGCTATGGAGAATGAAGAAATTCTTAGCTCCAGTGATGTGGTAATGGAAAAGAATGGTATTAGGAATGAAAGCTTCATAAAGTTGAAAGCTGAAGACGAATGTGTGAAACCTACAAGAAAGGAGGCTGATGCTCAAGTGACTGAGAATCAATTGCCAGCCAAGGAGAATGAAATTCTTAGCTCTAGTGATGTGGTAATGGAAAAGAATGGTATTAGGAATGAAAGCTTCATAAAGTTGAAAGCTGAAGACGAATATGTCAAACCTACAAGAAAGGAGGCTGATGCAGGTTGTCACAGCCCTTATTCTTCACCAGTTGGTGAATCTGTGATTGACAAACAAATTGGTGGGAGTACTGAAACTTGTGGCAACAAATCTGACAAACGTCTATCTTTCTTTGGTTGGATTAGAAGTTGGTGGCCATTCTGGAGAAGTgatgaaaattccaatcatttGATTGCTCAACAGAACAAGATGATTAGTAATACTGGAGAGTCTGAGTTATTGAAACTGAACCTGACAGTTAATCATTCTGAGGAGCCTAGAGAAATGAAACAGTCTGCTAGTCATTCTGAGGAGCCAAGAGATATGAAACAGTCTGCTAGTCATTCTGAGGAGCCAAGAGATATGAAACAGTCTGCTAGTCATTCTGAGGAGCCAATAGATATGAAACAGACAGCTAGTCATTCCGAAGAGCCCGAATTATCAAATCTGAAACAAATGGTTAGTCCTGCTGATGAGCCCGAGTTATCAGAAACGAAACAGACAATGAATCGTTCTGGAGAAGCTGAGTTATTTTCTAGTAGTTCATTTTGGACTGACATGGAATCTTTTATTACCACCCGCAAGGGATCAATTCTTGTCTGCCAGTCAAGAAGCAGGAAGGATATGATGCAACATTTTCGAAAGTTTGGACCCATAATTCTAAAATCTCTTAGTGAAGATGATCTCCTTCAACTGGTGGATTTGTTAATATCAGAGAAAAAATGGTTGGAGGAAAAACCCTCTGAGACTTTTCCTTTCCGTCTCGTTGCACCGGATGGAAAGAGTTCAGGGGGCCTATCTCATGGTGCAAATGGCTTGAGATCTATTTTCTTAAGCAGAACAAAACAGGGTAACTTGCAGAAATCTTCAGAAGgtgatttgaataaaaaatgtcAGAGTATATCTCACACCGGAGTTTCTTCACCTGCCACCAATGGAAAGGAGCACACTGAGAGGTCCAGAACTGACATCTTAGCAGATACTAAGAAACTTGTGAGCGAGATATTGAAGGCACACTCGGAGGGGTTTAATATTTGTACTATCCCAAAGCTTTTTCTTGATAGGTATGGCTATCCTCTTGATTTTCGGAAGCTTGGTTATCCAAAGTTGGCATCTTTATTACAGACTTTGCCTGGAGTGAAAATAGAGTCCGGTCGTATCATTCCTACTGATCATGCCATTTGGGCTTCTAACCCGGAAACCACACTTCTCAATACTCAAGAGATCAATTCAAGTGATGCAGTATTCTATTCAGATAGTGAGTTGTCTGATTCATACCCTAAAGATGATAGCAAAGATTCTCCATGGGAGGAATTAGGTCCAGTTTCTGTCGTGAATTATAACCAGAGAGATCTAGAATCAAAAGTAAGGGCGAAAGCTGTAGAGATGGAGACATCAGTGCATCCTGATTATGAACCTTCACTTTCAGATGATGGTTCTTCTGAATCTGAAGAAGATAGCTCTTCTTTTACTCAACCAAATAAGGAAGGAAAGACAAAATATGATGGGGATGACAGTTCTCTTCTGGAAACTCTGGAGTCATGGTATAACAATCAAGAAGGAGAGGATAGTCCGAAATCAGACAATGCTAAGATCACAGGTGTGACTGATGATGTAAATCCATCATCCATGCAGTCTACTTCAAGAACCCGTTCTAAAAATCTTGCAGGGGCGTATAGGGAGAAGCAAAAACCTCCAAAGAGCTATTCATTTGTTGCTGACTCAAATGGGAAGGACCCGCTGGTTGATGGAATATTACATACCTTGAGGAAATCAAAAGACTTGAAGATGCAAAATTGA 3384 0.404 MDHLSVFSLSLLIASPADITSRDLLSLKPREVIAMSRILFLKNLFIFSASFASSSSSSSSSSFRRLLQVSHFATSSSYPLSGRRHEEESRNVPVSVWWDFENCNLPVDVNIYRIAHCITEAVRAKGIKGPIQITAFGDVFQLTRAKQEALSSTGITLTHIPNGGKNSADRSLLVDLMYWVSQNPPPAHLFLISGDRDFAGILHRLRMNNYNILLASPEDRSPSVLCSAATIMWHWNTLLKGKDLSGKHFNHPPDGPFASWYGHHKVPLEDPFPIDEQSTCLQTEDNSELRPPPKAITRHIRHVLYSYPKGISLSELRVELSKADIHLDKDYYGHRKFSRFLLSVANIKFWIGPDKQLFVAPQKIPESYCRGLVATTSSVDNEELNFVATSKLSGEGESVVKDAAGTPLMASSNDFGVEDVPEKAQQVEDVVNAQVTENRLPAMENEEILSSSDVVMEKNGIRNESFIKLKAEDECVKPTRKEADAQVTENQLPAKENEILSSSDVVMEKNGIRNESFIKLKAEDEYVKPTRKEADAGCHSPYSSPVGESVIDKQIGGSTETCGNKSDKRLSFFGWIRSWWPFWRSDENSNHLIAQQNKMISNTGESELLKLNLTVNHSEEPREMKQSASHSEEPRDMKQSASHSEEPRDMKQSASHSEEPIDMKQTASHSEEPELSNLKQMVSPADEPELSETKQTMNRSGEAELFSSSSFWTDMESFITTRKGSILVCQSRSRKDMMQHFRKFGPIILKSLSEDDLLQLVDLLISEKKWLEEKPSETFPFRLVAPDGKSSGGLSHGANGLRSIFLSRTKQGNLQKSSEGDLNKKCQSISHTGVSSPATNGKEHTERSRTDILADTKKLVSEILKAHSEGFNICTIPKLFLDRYGYPLDFRKLGYPKLASLLQTLPGVKIESGRIIPTDHAIWASNPETTLLNTQEINSSDAVFYSDSELSDSYPKDDSKDSPWEELGPVSVVNYNQRDLESKVRAKAVEMETSVHPDYEPSLSDDGSSESEEDSSSFTQPNKEGKTKYDGDDSSLLETLESWYNNQEGEDSPKSDNAKITGVTDDVNPSSMQSTSRTRSKNLAGAYREKQKPPKSYSFVADSNGKDPLVDGILHTLRKSKDLKMQN 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0167 1127 PANTHER LIMKAIN B LKAP 50 1067 IPR024768 GO:0005777|GO:0010468|GO:1903231
Sto1g0167 1127 Pfam OST-HTH/LOTUS domain 294 346 IPR025605 -
Sto1g0167 1127 Pfam OST-HTH/LOTUS domain 854 913 IPR025605 -
Sto1g0167 1127 MobiDBLite consensus disorder prediction 948 968 - -
Sto1g0167 1127 Pfam NYN domain 94 229 IPR021139 GO:0004540
Sto1g0167 1127 MobiDBLite consensus disorder prediction 616 669 - -
Sto1g0167 1127 MobiDBLite consensus disorder prediction 689 703 - -
Sto1g0167 1127 MobiDBLite consensus disorder prediction 989 1110 - -
Sto1g0167 1127 PANTHER EMB|CAB71880.1 50 1067 - -
Sto1g0167 1127 ProSiteProfiles OST-type HTH domain profile. 852 926 IPR025605 -
Sto1g0167 1127 CDD LOTUS 857 910 - -
Sto1g0167 1127 Gene3D - 847 916 IPR041966 -
Sto1g0167 1127 Gene3D - 85 237 - -
Sto1g0167 1127 ProSiteProfiles OST-type HTH domain profile. 292 363 IPR025605 -
Sto1g0167 1127 MobiDBLite consensus disorder prediction 615 703 - -
Sto1g0167 1127 MobiDBLite consensus disorder prediction 1038 1082 - -
Sto1g0167 1127 MobiDBLite consensus disorder prediction 828 848 - -
Sto1g0167 1127 CDD PIN_limkain_b1_N_like 93 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0167 Sto-Chr1 1207274 1212747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0167 95 241 C2H2 Transcription Factor Family AT5G61190 46.259 2.09e-36 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0167 - - lang:109328441 894.034