Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0164 ATGGCCAATGAACAGCACATTTCCCAGCTATATCCTGGCTTCAAGGCATCTCAGGTGGATTGGAAGGACCATAATGGACTCTTCTTAGTATCGAACAGCTCGGTTTTTGCTTTCGGGTTTTTCGGATATGAAACTCCACAAATATATTGGTCCACAAATGTCAGTAAGAAAGTTCATTCTGCTTCTTTGGTTTCAAATTCTTGGGATTTCTATGATCAAAATGGAGATTTACTGTGGAAATCTGTGTTCACTGAGAAATCTAATGATCCTAAGGCAATGTTTGCTGCTATTTTAGAACCTAATGGTGTAATCTCTTTCTATGATCTTAACAAAGGAAAGTCTGTTACTCCTGAGACAATGAGAATCCCTCAAGATCCTTGTGGTATTCCTGAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAGAATTGGTGTGAATGCCCTAAACTTCTCAAATCTCGGTTCAATTGCAAACTTCCAAACACGTCCTTGTGTTCTAGAACGCCGAAAGAACTTATCTATGTCGGCGAAAAGCTAGACTACTTTGCACTCAAGTATGTTCAACCAGTTTCAAAATCAAACCTGAGTGCTTGCAGAGACGAATGCCTAAGGAATTGCTCGTGCCGTGTGCTTTTCTTTGAGAATAGTACCGGGAAGTGCTTCCATTTTGATCAAACGGGGAGTTTCCAACGCTATAAAGGGAGTTCTGGAGGTTATGTTTCATACATGAAGGTCTCAATTGAAGACAATGGAGATGGAAGGAATGGGAGGAATAATGCAACTCTAGTAGTTGTAGCCATAGTTATGCTCACAATTCTGGTTATTGTAGGACTTGTAATGGGATTCTGGTACTACAAGAAAAAGTACTATTTCTTGGAGAATTCTGCAGAAACCTTGGAGGAAGATGATTTCTTGGATAATTTTCCCGGTATGCCTACTCGTTTCCGTTATAGTATTCTCAGTAAAGCCACTAAAAGCTTCTCTTCAAAAATTGGAGAAGGAGGATTTGGCTCAGTTTATTTAGGTGTTCTTGAAGATGGAACTCAATTAGCAGTGAAAAAACTGGAAGGATTAGGACAAGGGACAAAAGAGTTCAAAGCTGAAGTTTCAAGCATTGGGAGTATTCACCATGTCCATCTAGTGAAGCTGAAGGGCTTCTGTGCCGAAGGCCCTCATCGCCTTCTCGTGTACGAATACATGGGAAGAGAGAAGAGTGATGTGTACAGCTTTGGTATGGTGTTACTTGAGATTATTGGAGGAAGGAGGAATTATGATCAATGGGAAGGCTCAGAGAAAGCACATTTTCCTTCTTATGCATTTAGGATGATGGAAGAAGGGAAACTGAAGCAAGTTCTTGATCCAAAGATAGACATTGATGAGAGTGATGAGAGAGCTGTGACAGCAATTAAGGTTGCTCTGTGGTGTGTGCAAGATGACATGAATTCTAGGCCTTCCATGACAAAGGTTGTCCAAATGCTTGAAGGTGTTTGTCCTGCACCTGATCCACCATCATCAGCAACATCATCTACTTTTGGTTCTTATGCAGCATTTTTGAAGATGAGTAGTGGAGAAGCTTCTTCTTCAGGACAAGCTAGTTTTTACAGTAATGTACCCATGTCTTGTGTTCAGTTATCAGGACCTAGATGA 1647 0.4068 MANEQHISQLYPGFKASQVDWKDHNGLFLVSNSSVFAFGFFGYETPQIYWSTNVSKKVHSASLVSNSWDFYDQNGDLLWKSVFTEKSNDPKAMFAAILEPNGVISFYDLNKGKSVTPETMRIPQDPCGIPEPCDPYYVCFFENWCECPKLLKSRFNCKLPNTSLCSRTPKELIYVGEKLDYFALKYVQPVSKSNLSACRDECLRNCSCRVLFFENSTGKCFHFDQTGSFQRYKGSSGGYVSYMKVSIEDNGDGRNGRNNATLVVVAIVMLTILVIVGLVMGFWYYKKKYYFLENSAETLEEDDFLDNFPGMPTRFRYSILSKATKSFSSKIGEGGFGSVYLGVLEDGTQLAVKKLEGLGQGTKEFKAEVSSIGSIHHVHLVKLKGFCAEGPHRLLVYEYMGREKSDVYSFGMVLLEIIGGRRNYDQWEGSEKAHFPSYAFRMMEEGKLKQVLDPKIDIDESDERAVTAIKVALWCVQDDMNSRPSMTKVVQMLEGVCPAPDPPSSATSSTFGSYAAFLKMSSGEASSSGQASFYSNVPMSCVQLSGPR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0164 548 Pfam PAN domain 186 233 IPR003609 -
Sto1g0164 548 ProSiteProfiles Protein kinase domain profile. 325 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0164 548 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 403 548 - -
Sto1g0164 548 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 402 - -
Sto1g0164 548 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 41 - -
Sto1g0164 548 Gene3D Phosphorylase Kinase; domain 1 293 394 - -
Sto1g0164 548 Pfam Protein kinase domain 328 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0164 548 CDD PAN_AP_plant 190 246 - -
Sto1g0164 548 Gene3D Transferase(Phosphotransferase) domain 1 395 501 - -
Sto1g0164 548 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Sto1g0164 548 ProSiteProfiles PAN/Apple domain profile. 165 246 IPR003609 -
Sto1g0164 548 SUPERFAMILY Protein kinase-like (PK-like) 314 514 IPR011009 -
Sto1g0164 548 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 41 - -
Sto1g0164 548 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 403 548 - -
Sto1g0164 548 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 42 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0164 Sto-Chr1 1188542 1190887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0164 384 505 Receptor kinase-like Gene Family AT5G20050 40.000 3.27e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto1g0164 Pkinase 4.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0164 - - gmx:100816004 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0164 1 1188542 1190887 Sto1g0164 1 1188542 1190887 ECH