Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0156 ATGGCCATTGCTACATCTCTTGCTTTCCCTTCTCTGCTCCAACcctctacttcttcttcttcttcctgtttCTTTGGTGGGGTCCACCTCCGTTCCCATCAAAACTTCATTTCTGTACATtcgccttcttcttcttcttctctctcttctagGCGCCTGAGAATAGTCGCTGTTGCTTCTGGCGACTATTATGCTACTCTAGGTGTCCCCAAATCTGCCACAGGCAAGGAAATCAAAGCGGCTTATCGAAGGTTAGCTCGCCAGTACCATCCTGATGTGAACAAGGAGCCTGGAGCAACTGATAAGTTTAAAGAGATTAGTGCTGCTTATGAGGTGCTATCAGATGATAAGAAGAGGGCTTTATATGATCAATATGGAGAAGCTGGAGTGAACAGCACTATGGGAGGAGCATCAAGTGCCTATGCgACTAATCCATTCGATTTATTTGAGACATTTTTTGGGTCAAGTATGGGTGGCTTCCCTGGCATGGATCCAACTGCATTTGGAACACGCCGCCGCAGTACTGTTACTAAGGGTGAAGACATCCGTTATGACATATCCTTGGAATTTTCTGAGGTGATTTTTGGAGCAGAGAGAGAATTTGAGCTTTCCCATCTGGAAACCTGTGAAGTCTGTATTGGTACTGGAGCAAAGGTGGGCTCCAAGATGAGAATATGCTCAACTTGTGGTGGTAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGAATGTTCTCACAGGTTTCAGTATGTCCGAACTGTGGAGGGGATGGTGAAGTCATATCCGAATATTGCAGTAAATGCGGTGGAAAAGGACGTCTACgggttaagaaaaaaattaaagtcaaAGTTCCTCCCGGTGTAAGCTCAGGCAGTATATTGAGAGTTGCTGGGGAGGGTGATGCTGGACCAAGAGGGGGCCCTCCAGGAGATCTTTATGTGTATCTTGTTGTGGAAGAAATACCAGGAATTCAACGTGATGGCATTAATCTCAGCTCGACAATTACAATCAGTTACTTAGATGCCATACGAGGGACCATTGTGGAGGTAAAGACGGTTGAAGGCATTTCTGCCCTACAAATACCTCCTGGTACCCAACCTGGAGATATCCTTGTCCTTGCAAGGAAGGGTGTACCAAAATTAAACAAACCATCAATACGTGGTGATCATTTATTTACAGTTAAAGTTACAATTCCAAAACGTATAAGTATGAACGAACGTGAGTTGCTTGAAGAACTTGCTTCACTAAGCAACAACCCAACAAGCAACCGTTCAAAACCCGGCCCTAGAAGTCAATCCTCGAGAGGAAATACCGAAGGTCCAGCATCTCAAATAGCTGATAGTCCAGTAGCAACAGCTACAGAAAAAGACGAACAAATGGAAGATCAAAATGATATATGGAAGAAGATAACGGATTTTGCTGGGTAA 1431 0.4221 MAIATSLAFPSLLQPSTSSSSSCFFGGVHLRSHQNFISVHSPSSSSSLSSRRLRIVAVASGDYYATLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATDKFKEISAAYEVLSDDKKRALYDQYGEAGVNSTMGGASSAYATNPFDLFETFFGSSMGGFPGMDPTAFGTRRRSTVTKGEDIRYDISLEFSEVIFGAEREFELSHLETCEVCIGTGAKVGSKMRICSTCGGRGQVMRTEQTPFGMFSQVSVCPNCGGDGEVISEYCSKCGGKGRLRVKKKIKVKVPPGVSSGSILRVAGEGDAGPRGGPPGDLYVYLVVEEIPGIQRDGINLSSTITISYLDAIRGTIVEVKTVEGISALQIPPGTQPGDILVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISMNERELLEELASLSNNPTSNRSKPGPRSQSSRGNTEGPASQIADSPVATATEKDEQMEDQNDIWKKITDFAG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0156 476 SUPERFAMILY HSP40/DnaJ peptide-binding domain 326 411 IPR008971 GO:0006457|GO:0051082
Sto1g0156 476 Hamap Chaperone protein DnaJ [dnaJ]. 59 474 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Sto1g0156 476 Gene3D - 322 428 - -
Sto1g0156 476 Gene3D DnaJ domain 59 162 IPR036869 -
Sto1g0156 476 SMART dnaj_3 61 118 IPR001623 -
Sto1g0156 476 MobiDBLite consensus disorder prediction 416 466 - -
Sto1g0156 476 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
Sto1g0156 476 PANTHER MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN 52 428 - -
Sto1g0156 476 MobiDBLite consensus disorder prediction 416 451 - -
Sto1g0156 476 ProSiteProfiles dnaJ domain profile. 62 126 IPR001623 -
Sto1g0156 476 SUPERFAMILY Chaperone J-domain 59 164 IPR036869 -
Sto1g0156 476 Pfam DnaJ domain 62 123 IPR001623 -
Sto1g0156 476 CDD DnaJ 62 115 IPR001623 -
Sto1g0156 476 ProSiteProfiles Zinc finger CR-type profile. 196 278 IPR001305 GO:0031072|GO:0051082
Sto1g0156 476 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 52 428 - -
Sto1g0156 476 Gene3D - 209 273 - -
Sto1g0156 476 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 196 276 IPR036410 -
Sto1g0156 476 PRINTS DnaJ domain signature 64 82 IPR001623 -
Sto1g0156 476 PRINTS DnaJ domain signature 82 97 IPR001623 -
Sto1g0156 476 PRINTS DnaJ domain signature 98 118 IPR001623 -
Sto1g0156 476 PRINTS DnaJ domain signature 118 137 IPR001623 -
Sto1g0156 476 Gene3D - 179 315 - -
Sto1g0156 476 SUPERFAMILY HSP40/DnaJ peptide-binding domain 177 320 IPR008971 GO:0006457|GO:0051082
Sto1g0156 476 Pfam DnaJ central domain 209 273 IPR001305 GO:0031072|GO:0051082
Sto1g0156 476 CDD DnaJ_C 180 403 - -
Sto1g0156 476 TIGRFAM DnaJ_bact: chaperone protein DnaJ 62 416 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Sto1g0156 476 Pfam DnaJ C terminal domain 182 400 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0156 Sto-Chr1 1087956 1092923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0156 63 125 C2H2 Transcription Factor Family AT1G74250 47.826 2.59e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0156 K03686 - gmx:100798567 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0156 1 1087956 1092923 Sto1g0156 1 1087956 1092923 ECH