Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0148 ATGGCGCTGCGGCTGGACGGATTGTCGGTGACGAAGCCGAAAGGATTGAACGCCGGCGCGTCTGTTTCTTCCTTGGATTCGCCCTTTTCTGTGGAGCTAGCTCGAACTAGGAGGAGGTTAGGGCAAAGCCGACCACTTGGACGGAACGCATGTGAGCCTTTGGCCAATAGCCAAACCATGACCGGCGATACCGCGTATTCTCCGGACGTCAAGAGCTTGTCGCCGAGTCAAAACCTCGACATCGCGTTAGAGGAAGGATCTCCTAACAGTGAGCAATTGCTTGAGGTTGAGGATGAGGGCAACGACTTTGAAAATGACTGTGGGCAACTGTTTGAGATTGATGGAAGTGAACATGAAAATGGGAGAGATGAAACAGAACTAGTTGATTGTCATAATGAAGAATCTGAAGTAAAAGACTACCATCCACCAGTTGTAGGGATGGAGTTTGATACCTATGATGATGCCTACAACTACTATAATAGCTATTCCAAGGAACTTGGATTTGCTATTAGGGTTAAATCTTCGTGGACCAAACGTAACAGCAAAGAGAAGCGTGGTGCTGTGCTCTGCTGCAACTGTGAGGGTTTCAAAACAGCTAAAGAAGCAAATAGTCGTAGGAAAGAAACAAGAACGGGCTGTCTAGCAATGATTAGGTTGAGATTAGTGGAATCTAACAAATGGAGGGTGGATGAAGTGAGGCTTGATCATAACCATTCATTTGATCCTGAGAGAGCACAAAACTCTAAATCACATAAGAGGATGGACAGTGGAGCTAAAAGAAAGGTTGAGCCAACTCTAGACGTTGAAGTACGAACAATCAAGTTATATCGAACACCTGTTGTAGATGCATCAGGTTATGGAAGCTCAAATGCTAATGAAGAAGGAACTAACAACCATGTTGGTTTTTCCAGGCATTTGAAACTTAAAAAAGGAGATGCAGAAGTTATTTCAAATTACTTCTGCCACAGTCAGCTgatgaatcctaattttttctaTGTGATGGATCTGACTGATGATGGACACATGAGAAACATCTTTTGGATTCATTCTAGATCAAGGGCTGCATATGGTTACTTTGGTGATGTGGTTGCATTTGACTCAACATGCTTGCCAAACAATTATGAGATTCCACTGGTTGCATTTGTTGGTGTTAATCACCATGGGCAATCTATTTTGCTAGGATGTGGTCTGCTTGCTGATGAGACATTTGAAACATACATTTGGTTATTTAGGGCATGGCTTACATGTATGTCTGGTCGTCCTCCGCAAACTATCATCACAAACCAGTGTAAAGCCATGCAAAGTGCAATAGCAGAGGTTTTCCCAAGAGCTCACCATAAAATTTATCTTTCGCAAGTCATGCAGAGCCTTCTTGGAGACTTGGTCCAGTTGCGGGAATATGAGGCAGTTCAGATGGCATTGACTACTGTGATATATGACTCTAAAACAGTAGATGAATTTGAGAAGGCTTGGGATGATTTGTCTCGACATTTTGGAATAAGCAATCATCAGAAGTTTCAAACCTTGCATGAAGAACGGGAGCGTTGGGCCCCTGTTTATTCCAAGGACACATTCTTTGCTGGAATTTCTGATTTTGAAAAGGGTGAGTCGATCATTCCCTTTTTCGATGATCACGTGCATCAACAAACTTCTTTGAAAGAATTTTTTGACATTTTCGAACTATTTCTACAAAAGAAACATAAAAAGGAAGCTCTTGCTGATTTAGAGTCAAGAGATTCAATCCCTTTACTGAAAACAAGATGCTACTATGAGTTGCAGCTCTCAAAATTGTACACAAATGCTATATTCAGCAAGTTCCAAGATGAGGTGGTGACGATGTCTTCTTGTTTCAGCATCACACAAATTCAAACAAGTGGGTCTATATCGACGTACATAGTTAAAGAACGTGGAGGGGAAGAATCAATGAGGGAAGCTAAGCATTTTGAAGTCATGTATGATAAAGCAGGAGCAGATGTTCGCTGTGACTGTAGTTGCTTTAACTTGAAAGGCTATCTATGCAGGCATGCCTTGTGTATCCTCAACTATAATGGTGTAGAAGAAATTCCATGTCAGTATATTTTGTCAAGATGGAGGAAGGATTATAAGAGATTGTATGTACCACATCTCAGTTCCAATAATGTTGATATAACAAACTCTGTTCAGTGTCATGATCATTTGTACAGAAGGGCTATGCAAGTTGTTGAAGAAGGGATGCTATCCCAAGATCATTATATGGTTGCCTGGCAGGCATTTAAAGAGTCCTTGAATAAGGTCCGCCTTGTAGCAGATAAGATTGAATAA 2301 0.4129 MALRLDGLSVTKPKGLNAGASVSSLDSPFSVELARTRRRLGQSRPLGRNACEPLANSQTMTGDTAYSPDVKSLSPSQNLDIALEEGSPNSEQLLEVEDEGNDFENDCGQLFEIDGSEHENGRDETELVDCHNEESEVKDYHPPVVGMEFDTYDDAYNYYNSYSKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTAKEANSRRKETRTGCLAMIRLRLVESNKWRVDEVRLDHNHSFDPERAQNSKSHKRMDSGAKRKVEPTLDVEVRTIKLYRTPVVDASGYGSSNANEEGTNNHVGFSRHLKLKKGDAEVISNYFCHSQLMNPNFFYVMDLTDDGHMRNIFWIHSRSRAAYGYFGDVVAFDSTCLPNNYEIPLVAFVGVNHHGQSILLGCGLLADETFETYIWLFRAWLTCMSGRPPQTIITNQCKAMQSAIAEVFPRAHHKIYLSQVMQSLLGDLVQLREYEAVQMALTTVIYDSKTVDEFEKAWDDLSRHFGISNHQKFQTLHEERERWAPVYSKDTFFAGISDFEKGESIIPFFDDHVHQQTSLKEFFDIFELFLQKKHKKEALADLESRDSIPLLKTRCYYELQLSKLYTNAIFSKFQDEVVTMSSCFSITQIQTSGSISTYIVKERGGEESMREAKHFEVMYDKAGADVRCDCSCFNLKGYLCRHALCILNYNGVEEIPCQYILSRWRKDYKRLYVPHLSSNNVDITNSVQCHDHLYRRAMQVVEEGMLSQDHYMVAWQAFKESLNKVRLVADKIE 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0148 766 MobiDBLite consensus disorder prediction 37 71 - -
Sto1g0148 766 MobiDBLite consensus disorder prediction 238 261 - -
Sto1g0148 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 86 763 - -
Sto1g0148 766 ProSiteProfiles Zinc finger SWIM-type profile. 648 684 IPR007527 GO:0008270
Sto1g0148 766 Pfam MULE transposase domain 362 455 IPR018289 -
Sto1g0148 766 Pfam FAR1 DNA-binding domain 157 241 IPR004330 -
Sto1g0148 766 SMART 26again6 659 686 IPR006564 GO:0008270
Sto1g0148 766 MobiDBLite consensus disorder prediction 52 71 - -
Sto1g0148 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 86 763 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0148 Sto-Chr1 1048752 1053504 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto1g0148 MULE 2.7e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0148 K17604 - gmx:100796448 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0148 1 1048752 1053504 Sto1g0148 1 1048752 1053504 ECH