Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0117 ATGGCCACCGCAGGTATTGGTAAGACGGTGTGCGTTACCGGCGCCGGCGGATTTGTGGCGTCTTCTCTCGTTAAGCTTCTCCTTTCCAAGGGCTATTTTGTTCATGGCACCGTCAGACAACCCGGTGATGAGAAGTATGATTTCTTGCTTAAACTCGAGCGAGCGTCTGAGAACCTCAAGCTCTTCAAGGCTGATCTCTTGAATTACGAATCTCTCTATTCTGCAATTGTTGGATGTAGTGCAGTTTTTCATATTGCTAGTCCTGTGCCCTCTTCATCTGTTCCCAATCCTGAGGCAAGAATTTACTTCAGAGGTCAGAAGTATCCATGTGTAATCCGTGTAGTGGAAGTGGTTGAGCCTGCTGTGAAGGGCACTACTAATGTACTAGAAGCTAGTCTTGAAGCAAAAGTGGAACGGGTTGTCTTTGTATCATCTAAAGCTGCTGTTTCTATGAACCCCAAGTTATCCAAGGATAAAGTGATTGACGAATCCTGCTGGTCTGATAAAGAGTACTGCAGAAAAATGGAGAACTGGTATTGCTATTCTAAGACAGAGGCAGAGTTGCAGGCCCTGGACTTTGCAAAAAGAACTGGGTTGGCAGTGGTAACTATTTGTCCTAGCCTTGTATTGGGGCCAATTTTACAGTCAACCGTTGTCAATGCAAGTAGCTTGGTTCTCCTCAAGCTATTAAAAGGTTGTGAGTCGTTGGAGAATAAGCAGCGGTGGATAGTGGATGTACGTGATCTAGCTGATGCAATACTTATGGCTTATGAGAAGCCTGAGGCAGAAGGGAGATACATATGCACTGCACATTCTATCAAGATACAGGAATTGGTTGAGAAACTAAGGACTTTATATCCAAACTACAGCTTCCCTAAGAACTATATTGAGGTAGATTATTACGCAAGGGTGAGCACAGAAAAACTGCAGAGGTTGGGTTGGAGATACAGGTCATTAGAGGAAACACTCGTTGATTCTGTTGAGAGCTACAAGGAGGCAGGTTTTCTGGAATCAAAATAG 1020 0.4431 MATAGIGKTVCVTGAGGFVASSLVKLLLSKGYFVHGTVRQPGDEKYDFLLKLERASENLKLFKADLLNYESLYSAIVGCSAVFHIASPVPSSSVPNPEARIYFRGQKYPCVIRVVEVVEPAVKGTTNVLEASLEAKVERVVFVSSKAAVSMNPKLSKDKVIDESCWSDKEYCRKMENWYCYSKTEAELQALDFAKRTGLAVVTICPSLVLGPILQSTVVNASSLVLLKLLKGCESLENKQRWIVDVRDLADAILMAYEKPEAEGRYICTAHSIKIQELVEKLRTLYPNYSFPKNYIEVDYYARVSTEKLQRLGWRYRSLEETLVDSVESYKEAGFLESK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0117 339 Gene3D - 2 339 - -
Sto1g0117 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 331 IPR036291 -
Sto1g0117 339 Pfam NAD dependent epimerase/dehydratase family 10 263 IPR001509 -
Sto1g0117 339 Coils Coil 52 72 - -
Sto1g0117 339 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 336 - -
Sto1g0117 339 CDD FR_SDR_e 10 314 - -
Sto1g0117 339 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0117 Sto-Chr1 797339 799929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0117 1 337 Monolignol Biosynthesis Gene Families AT2G33590 59.467 3.45e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0117 - - gmx:100784817 454.136