Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0114 TTGGGTGAAAGTGGTTCTAGGCTTGTTTACCGAGCTAGTTTGGATGAGCATTTTAAGGCAGCagtgaagaaaggagatagCAGTGCTGATCGAGAATTCGAGAATGAAGTGAGTTGGTTGAGCAAGATTCGGCATCAGAATATTATAAAACTTCTTGGTTATTGCATTCATGGTGAATCAAGGTTTCTTGTTTATGAAATGATGGAGAATGGATCTTTGGAAACTCAACTGCATGGGCCTAATCATGGATCATCTTTAAATTGGCACCTTCGATTAAGAATTGCCGTTGATGTTGCCAAGTGA 303 0.3762 LGESGSRLVYRASLDEHFKAAVKKGDSSADREFENEVSWLSKIRHQNIIKLLGYCIHGESRFLVYEMMENGSLETQLHGPNHGSSLNWHLRLRIAVDVAK 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0114 100 PANTHER OS01G0253100 PROTEIN 1 100 IPR045271 GO:0004714|GO:0006468
Sto1g0114 100 Pfam Protein tyrosine and serine/threonine kinase 10 100 IPR001245 GO:0004672|GO:0006468
Sto1g0114 100 Gene3D Transferase(Phosphotransferase) domain 1 1 100 - -
Sto1g0114 100 SUPERFAMILY Protein kinase-like (PK-like) 1 100 IPR011009 -
Sto1g0114 100 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0114 100 PANTHER RECEPTOR-LIKE KINASE 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0114 Sto-Chr1 778432 778984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0114 1 100 Receptor kinase-like Gene Family AT1G80640 51.923 4.80e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Sto1g0114 PK_Tyr_Ser-Thr 5.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0114 - - gmx:100811188 184.496