Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0112 ATGGCAAGCCTCGAAGAGATCAAGAAGGAGAATGTTGACCTTGAGAGAATTCCCATTGATGAAGTGTTTCGTGAATTGGGCTGTTCGAGAGAGGGTCTCACAAGTGAAGAAGGAATAAAAAGACTTAATGAAAGCAAGCTTCTTAAATTCTTAGGGTTTATGTGGAATCCACTTTCATGGGTCATGGAATTGGCTGCCATCATGGCCATTGCTTTGGCCAACGGAGGGGGGAAGCCACCAGACTGGCAAGACTTTGTGGGTATTGTGGcattgttgttcataaactcGACCATTAGTTTCATAGAAGAAAACAACGCAGGCAATGCTGCTGCTGCACTTATGGCAGGCCTTGCCTTGAAAACCAaggtatcatcatcatcatcattatcattatcatcatcacattatatAGATGGAAAGTGGACTGAGCAAGAAGCTGCAACATTGGTACCAGGAGACGTAATTAGCATCAAACTAGGAGACATCATTCCTGCAGATGCTCGTCTCTTAGAAGGAGACCCTCTCAAGATTGATCAATCTGCCCTCACTGGAGAATCCTTACCTGTTACCAAAAATCCATCTGATGAAGTCTTCTCTGGCTCCACTGTGAAGCAAGGTGAGATTGAAGCTGTTGTCATTGCCACTGGTGTTCACACCTTCTTTGGTAAAGCTGCTCACTTAGTAGACAGCACCAACCAAACAGGACATTTCCAAAAGGTGTTGACGGCCATTGGTAACTTCTGCATTTGTGCGATCGCGCTTGGTATGATTGTGGAAATCATTGTGATGTATCCCATTCAGCATCGCAAGTACAGGAGTGGGATTGACAATCTCTTGGTGCTTCTCATTGGAGGCATTCCTATTGCCATGCCCACAGTTTTGTCTGTAACAATGGCTATTGGTTCTCATCGCTTGTCTCAACAAGGTGCTATCACTAAGAGGATGACAGCCATTGAGGAACTGGCTGGTATGGATGTTCTGTGTAGTGACAAGACTGGAACATTAACCTTAAACAAACTCACTGTTGACAAAAGCTTAATTGAGCTTTTTGTCAAAGATGTTGATCAAGACACTTTGATATTGCTTGGAGCAAGAGCCTCAAGGGTAGAGAATCAAGATGCCATTGATGCTTGCATTGTTGGAATGTTGGGTGACCCAAAAGAGGCAAGAGATGGCATCACAGAAGTTCATTTCCTACCATTTAATCCAGTAGACAAGCGTACAGCCatcacatatattgacaaagcAGGCAATTGGCACAGAGTGAGCAAAGGAGCACCCGAACAGATTGTAGACCTGTGCAATCTCCGAGAAGATGTAAAGAAAAAAGTCCATTCCATCATTGACAAGTTTGCTGATCGTGGTCTTCGTTCTCTTGCAGTTTCGAGACAAGAAGTGCCAGAAAAGAGCAAGGAAAGTCCAGGAGGAGCATGGGAATTTGTAGGTCTCTTACCTCTCTTTGATCCTCCTAGACATGACAGTGCAGAAACCATTAGACGTGCTCTTCACCTTGGAGTGAATGTGAAGATGATCACTGGGGATCAATTAGCCATTGGAAAAGAAACAGGTCGTAGACTTGGCATGGGAAGCAACATGTATCCTTCTTCCTCCCTCCTTGGTGAACACAAGGATGAATCCATTGCATCACTTCCCATTGATGAACTCATTGAGAAAGCTGATGGCTTTGCTGGCGTCTTTCCTGAGCACAAGTATGAGATAGTGAAGAGGCTGCAAGATAGGAAACACATATGTGGGATGACTGGAGATGGTGTGAATGATGCTCCAGCATTGAAGAAAGCAGACATTGGAATTGCTGTAGCAGATGCAACTGATGCAGCTCGAAGTGCATCAGACATAGTTCTGACAGAGCCTGGTTTGAGTGTGATTGTGAGTGCTGTGTTGACAAGCAGAGCCATTTTCCAGAGAATGAAGAACTACACCATCTATGCCGTGTCCATCACAATTCGAATTGTTCTAGGGTTCTTGCTTCTTGCTCTCATCTGGAAATTCGATTTCTCACCTTTCATGGTTTTGGTCATTGCCATACTGAATGATGGCACAATCATGACCATTTCTAAGGACAGAGTAAAGCCATCTCCAAGCCCAGATTCATGGAAACTCAATGAGATTTTCGCCACTGGAATCGTTCTTGGAGCTTACTTAGCTGTCATGACTGTTGTCTTCTTTTGGGCAGCTCATTCATCAGACTTCTTCTCTGAGAAATTTGGTGTGAGATCTATTAGGAACAGTGAGGAAGAACTCATGGCAGCTGTTTACCTTCAAGTGAGTATTGTGAGTCAAGCTCTCATCTTCGTCACAAGATCAAGAAGCTGGTCTTTCATTGAACGTCCCGGTTTGCTTTTGGTGGTAGCATTTCTCATAGCACAATTGATTGCGACTATAATAGCTGTATATGGAGATTGGGCATTTGCAAGAATAAAAGGAATAGGATGGGGATGGGCAGGTGTGATATGGATATACAGCATCGTCTTCTACATTCCTCTCGATATTCTCAAGTTCATTATTCGATATGCTTTGAGTGGAAAGGCATGGAACAATATTACAGAGAACAGGACTGCATTCACAACAAAGAAGGATTATGGAAAAGGCGAGAGAGAGGCCCAATGGGCCACGGCCCAAAGGACACTTCATGGGCTGAATCCTCCTCAAACAGACCAAACCATAGGCGATAAGGCCACTTATGGAGAATTGTCTGAACTTGCCGAACAGGCTAGAAAACGTGCAGAAGTTGCAagGTTGAGGGAGCTTCACACGCTGAAGGGACACGTGGAATCAGTGGTGAAACTGAAGGGGCTTGACATAGAGACAATTCAACAGCATTACACAGTCTAA 2853 0.4318 MASLEEIKKENVDLERIPIDEVFRELGCSREGLTSEEGIKRLNESKLLKFLGFMWNPLSWVMELAAIMAIALANGGGKPPDWQDFVGIVALLFINSTISFIEENNAGNAAAALMAGLALKTKVSSSSSLSLSSSHYIDGKWTEQEAATLVPGDVISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQTGHFQKVLTAIGNFCICAIALGMIVEIIVMYPIQHRKYRSGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLTVDKSLIELFVKDVDQDTLILLGARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDKAGNWHRVSKGAPEQIVDLCNLREDVKKKVHSIIDKFADRGLRSLAVSRQEVPEKSKESPGGAWEFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHKDESIASLPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLALIWKFDFSPFMVLVIAILNDGTIMTISKDRVKPSPSPDSWKLNEIFATGIVLGAYLAVMTVVFFWAAHSSDFFSEKFGVRSIRNSEEELMAAVYLQVSIVSQALIFVTRSRSWSFIERPGLLLVVAFLIAQLIATIIAVYGDWAFARIKGIGWGWAGVIWIYSIVFYIPLDILKFIIRYALSGKAWNNITENRTAFTTKKDYGKGEREAQWATAQRTLHGLNPPQTDQTIGDKATYGELSELAEQARKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0112 950 Pfam E1-E2 ATPase 136 307 - -
Sto1g0112 950 Pfam haloacid dehalogenase-like hydrolase 324 601 - -
Sto1g0112 950 CDD P-type_ATPase_H 32 840 IPR006534 GO:0008553|GO:0016021|GO:0120029
Sto1g0112 950 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 40 805 IPR006534 GO:0008553|GO:0016021|GO:0120029
Sto1g0112 950 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 846 IPR023298 -
Sto1g0112 950 PRINTS P-type cation-transporting ATPase superfamily signature 178 192 - -
Sto1g0112 950 PRINTS P-type cation-transporting ATPase superfamily signature 328 342 - -
Sto1g0112 950 PRINTS P-type cation-transporting ATPase superfamily signature 482 493 - -
Sto1g0112 950 PRINTS P-type cation-transporting ATPase superfamily signature 504 514 - -
Sto1g0112 950 PRINTS P-type cation-transporting ATPase superfamily signature 587 606 - -
Sto1g0112 950 PRINTS P-type cation-transporting ATPase superfamily signature 610 622 - -
Sto1g0112 950 ProSitePatterns E1-E2 ATPases phosphorylation site. 330 336 IPR018303 -
Sto1g0112 950 Gene3D - 325 624 IPR023214 -
Sto1g0112 950 PRINTS H+-transporting ATPase (proton pump) signature 444 462 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto1g0112 950 PRINTS H+-transporting ATPase (proton pump) signature 559 575 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto1g0112 950 PRINTS H+-transporting ATPase (proton pump) signature 587 603 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto1g0112 950 PRINTS H+-transporting ATPase (proton pump) signature 618 643 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto1g0112 950 PRINTS H+-transporting ATPase (proton pump) signature 759 780 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto1g0112 950 Gene3D - 340 487 IPR023299 GO:0000166
Sto1g0112 950 SFLD Haloacid Dehalogenase 310 639 - -
Sto1g0112 950 Gene3D - 81 814 - -
Sto1g0112 950 Gene3D - 899 950 - -
Sto1g0112 950 Gene3D - 119 215 - -
Sto1g0112 950 SUPERFAMILY Calcium ATPase, transduction domain A 136 228 IPR008250 -
Sto1g0112 950 SUPERFAMILY HAD-like 324 634 IPR036412 -
Sto1g0112 950 SFLD p-type atpase 310 639 IPR044492 -
Sto1g0112 950 SMART Cation_ATPase_N_a_2 13 74 IPR004014 -
Sto1g0112 950 PANTHER CALCIUM-TRANSPORTING ATPASE 3 927 - -
Sto1g0112 950 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 3 927 - -
Sto1g0112 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 562 673 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto1g0112 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 120 347 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0112 Sto-Chr1 765854 770640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0112 3 950 Primary Pumps ATPases AT3G42640 80.918 0.0 1580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0112 K01535 - zju:107408630 1606.27