Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0107 ATGAATGAACTTCTATTCTGGTTTACAGTTCTAGGTTTTGGACTGAACACAGTGACTATTGTTATGATTGTTGTTCTTGGATTCACTCAGAAGAGCAGCTTGGGGATTCAAAGATCACATGCCCAGATAACCTTTTTGGAGAAGTTTATTCTGAATTTTGTACCAGCTGCTGGAGCATGTGTTACAATTTTGGACATAATTTTTCTGTGGAAGGGAGAACATAATAGGCAATTTGTTGGATATCATAAGTGGTTTTATAGCTGTTCTGAGTTGATGGTGTGGACAAATATCATTCTCTTCTCAAAGTGTTCCAGCAATTGTTACATAGTCTGCAACTACGTCTTATGTTACTGGTGGATTCTGAAACCAATATTCTGGATCTTCCATTTGCTGACAAAGTTCCCATTCTTAGAGATTCCAGTACGTGTCATGGAAAGCtctatttttctcttcaataTTGCATTTGGCATCACTATCAATGTGATCAGAGTAAAGAGATTATCTTCCAAAAACAGTTTATTGGAAGACCCACTTCTTTCCAATGACATGGACCTTGAGGAAGGTTGCCATCATGACGTCGAAAAAGCTGGGAACTTTTGGGATTTGATGACTTTCAAATTCATAAATTGTGTATTGAATCATGGTGTGGTTAAACAACTGGACTCCGAAGATCTGCTGCAGCTACCTCCTGATATGGATCCATCTTCTTGTCACGATATAATTATAACCTGCTGGCAAGAACAACTGAGTAACAATGCTTCAAATGCATCTTTGCTTAGAGCAGTCTGTCATGCGTACGGATGGCCATATCTTCGCCTGGGTTTGTTGAAGGTGGTTAATGATTGTATTGGTTTTGCGGGACCTTTGCTTCTCAATAGGCTGATCCGGTTTCTTCAACAAGGTTCAGAGAATTTGGATGGGTATTTACTTGCAATATCCTTGGGTCTTACATCTATAATTAAGTCGTTTTTAGATACACAGTAtacttttcatctttccaaGCTGAAGCTAAAGCTGCGGTCTAGTATCATGACTCTAATATATCAAAAGTGTCTAGGTGTGAACCTAGTGGAGCGGTCAAAGTTCTCTAATGGAGAAATCCAGACATTCATGTCTGTAGATGCTGACCGAACTGTCAACATGTGTAATAGTTTCCACGATGTGTGGAGCTTGCCTTTACAAATTGGAGTGGCGCTTTATCTTTTGTATACTCAAGTCAAATTTGCGTTTGTATCTGGTTTAGCAATAACCATTTTGTTGATACCAGTGAATAAATGGATATCGAAATTGATTGCAAGTGCTACTGAGAAAATGATGAAGCAGAAGGATGAAAGGATACGGAGGACTGGAGAACTTTTGACCTACATTCGCACTTTGAAGATGCATGGATGGGAACTTCTTTTTTCTGGTTGGTTGATGGAGACAAGATCTTCTGAAGTGAAACACTTAGCTACTCGGAAGTACTTGGACGCATGGTGTGTGTTCTTTTGGGCTACAACACCaactctcttttctcttttcacATTCGGTCTCTTTGCATTGATGGGACATCAACTTGATGCTGCAATGGTTTTCACTTGCCTGGCATTGTTTAATACACTAATTTCACCACTTAATTCATTCCCCTGGGTGATTAATGGATTGATTGATGCCATTATATCCTCCAGAAGGTTGAGCAGGTTTCTGTCTTCTCCTGAAAATAAGTCTAAGATGGAAGAGACAAATTCATGTCCATCACCATTGCTTAGTAAACAGCTTAATTCTTCACAAGGTTTGGCTGTCCTAGTCCAAGATGCATGTTGTACTTGGTCAAGCAGTGATGAAGAAGCATCAAATTTGGTGTTGAATCATGTGAATCTAAGTCTGTCAAGGGGCTCCTTTGTTGCAGTAATAGGAGAGGTTGGTTCAGGCAAATCATCCTTGATATATTCAATTCTTGGAGAAATGCGGATTGCTCATGGATCAATTCATTCTGATGGATCAGTGGCTTATGTACCACAGGTCCCATGGATTTTATCTGGAACAATACGTGACAACATATTATTTGGGAAAAATTATGATCCCAAAAGGTATGCAGATACTGTGCAGGCATGTGCACTAGATGTTGATATCTCATTGATGGTTGGAGGCGACATGGCTTACATTGGGGAAAAAGGACTCAACTTATCAGGTGGACAGAGAACTCGTCTTGCTTTGGCAAGGGCACTCTATCATGGCTCTGATGTGATTATGCTTGATGATGTGCTGAGTGCTGTAGATGCACAAGTTGCTCGATGGATCTTACAGAATGCAATTCTTGGTCCTCTTACGCAGGGAAGAACTCGATTGCTCTGTACCCACAATACCCAGGCAATATCTTCTGCTGATATGGTTGTTATAATGGAAAAAGGACATGTAAAGTGGGTGGGAAGTCCAAATGACGTCCCAGTTTCTTCGTATAAAACATTCTCCCCGTCGAACGAACTTGATTCGGATGTACCGAATCAAGGACAATCTTGCAGCACAAGTTCttcttcaaaattaaaagagcTTCCAGATCGAGATATTAACCATGATCTGGATGGAGTAGAGGAGATCATTGAAGTTGAGCTGAGGAAAGAGGGCAAAGTGGAACTTGGAGTGTATAAGAACTATGCTATGTTCACTGGCTGGTTCATTACAGTTGTAATATGCCTGTCAGCTATTCTGATGCAAGCTTCTCGTAACGGAAATGATTTATGGTTATCATTTTGGGTTGACACAACAGAAAGCAGACAAACAGGATACTCTGTGTCCTTCTATCTGGCTGTACTATGTCTCTTTTGTATCATAAATTCCTTCCTCACATTGGTGAGGGCATTCTCTTTTGCATTCGGTGGCTTACAAGCGGCAATTAAAGTGCACAATAGAATGCTCGGTCAGCTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTTTCTTCAGATCTTTATACAATCGATGATTCTCTTCCATTCATTATGAACATTCTCCTAGCAAATTTTGTAGGCCTGTTGGGCATTGCAGTAGTTTTGTCGTATGTTCAGGTCTTTTTCTTGCTCCTGTTATTGCCATTTTGGTACATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCGAGAGAACTACGACGACTAGACAGTGTGTCTCGTTCTCCGATATATACATCTTTCACTGAAACACTTGATGGATCATCAACTATTAGGGCATTTAAATCTGAGGACTTTTTTTTCACCAAATTCATTGAACATGTAACATTGTATCAGAAGACTTCTTACACAGAGATTGCAGCTAGTTTATGGCTTTCCTTACGCCTTCAATTATTAGCTGCATTTATCATCTCTTTTATTGCCCTGATGGCTGTGATTGGAGCTCATGACAGTCTGCCCATCAACTTTGGTACCCCTGGGCTGGTAGGATTGGCACTCTCATATGCAGCTCCAATTGTGTCCTTGTTGGGAAGTTTCTTAACAAGTTTCACCGAAACAGAAAAGGAAATGGTTTCGGTTGAAAGAGTCCTTGAATATATGGACACTCCTCAAGAAGAACTCGATGGATGCATTGTCTTGAACCCAGATTGGCCAAATCAAGGAGTAATTGAGTTCCACAATGTTACTTTGAAATATATGCCATCTTTGCCACCTGCTCTCTGCAATCTTAGTTTTACCATTTCTGGAGGGACACAGATCGGAATTATTGGAAGAACTGGCGCCGGGAAGTCTAGCGTGTTGAATGCCCTTTTCCACCTTACCCCAATATGTACAGGCTCCATCCTCATGGACGGCATAAACATTAATAATATTCCTGTTAGAGAACTACGTGCTCATTTGGCTGTTGTTCCCCAGAGTCCATTCTTGTTTGAAGGATCATTAAGGGATAATCTCGATCCATTTCGAATGCATGATGACTTGAAAATTTGGAATGCTTTGGAGAAGTGTCATGTGAAACAGGAAGTCGAAGCAGCCGGAGGGCTAAGTATTCTCATAAAGGAATCTGGGATGTCATTTTCTGTTGGCCAACGGCAACTTCTTTGTCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTGTGTTTGGATGAATGCACAGCCAATGTAGACACTCAAACTGCTTCTCTTCTGCAAAGTACCATATGTAGTGAATGCAAGGGCATGACAGTAATTACAATCGCTCACCGGATTTCGACAGTTTTGAACATGGACAACATTTTAATTCTTGACCATGGAAACCTGGCTGAACAAGGAAACCCACAGGTTCTTCTGAGAGATGAATCCTCCATGTTTTCAAGTTTTGCTAAAGCTTCATCAATGTAA 4341 0.4013 MNELLFWFTVLGFGLNTVTIVMIVVLGFTQKSSLGIQRSHAQITFLEKFILNFVPAAGACVTILDIIFLWKGEHNRQFVGYHKWFYSCSELMVWTNIILFSKCSSNCYIVCNYVLCYWWILKPIFWIFHLLTKFPFLEIPVRVMESSIFLFNIAFGITINVIRVKRLSSKNSLLEDPLLSNDMDLEEGCHHDVEKAGNFWDLMTFKFINCVLNHGVVKQLDSEDLLQLPPDMDPSSCHDIIITCWQEQLSNNASNASLLRAVCHAYGWPYLRLGLLKVVNDCIGFAGPLLLNRLIRFLQQGSENLDGYLLAISLGLTSIIKSFLDTQYTFHLSKLKLKLRSSIMTLIYQKCLGVNLVERSKFSNGEIQTFMSVDADRTVNMCNSFHDVWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISKLIASATEKMMKQKDERIRRTGELLTYIRTLKMHGWELLFSGWLMETRSSEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAIISSRRLSRFLSSPENKSKMEETNSCPSPLLSKQLNSSQGLAVLVQDACCTWSSSDEEASNLVLNHVNLSLSRGSFVAVIGEVGSGKSSLIYSILGEMRIAHGSIHSDGSVAYVPQVPWILSGTIRDNILFGKNYDPKRYADTVQACALDVDISLMVGGDMAYIGEKGLNLSGGQRTRLALARALYHGSDVIMLDDVLSAVDAQVARWILQNAILGPLTQGRTRLLCTHNTQAISSADMVVIMEKGHVKWVGSPNDVPVSSYKTFSPSNELDSDVPNQGQSCSTSSSSKLKELPDRDINHDLDGVEEIIEVELRKEGKVELGVYKNYAMFTGWFITVVICLSAILMQASRNGNDLWLSFWVDTTESRQTGYSVSFYLAVLCLFCIINSFLTLVRAFSFAFGGLQAAIKVHNRMLGQLINAPVQFFDQTPGGRILNRFSSDLYTIDDSLPFIMNILLANFVGLLGIAVVLSYVQVFFLLLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDFFFTKFIEHVTLYQKTSYTEIAASLWLSLRLQLLAAFIISFIALMAVIGAHDSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERVLEYMDTPQEELDGCIVLNPDWPNQGVIEFHNVTLKYMPSLPPALCNLSFTISGGTQIGIIGRTGAGKSSVLNALFHLTPICTGSILMDGININNIPVRELRAHLAVVPQSPFLFEGSLRDNLDPFRMHDDLKIWNALEKCHVKQEVEAAGGLSILIKESGMSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTICSECKGMTVITIAHRISTVLNMDNILILDHGNLAEQGNPQVLLRDESSMFSSFAKASSM 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0107 1446 ProSitePatterns ABC transporters family signature. 722 736 IPR017871 GO:0005524
Sto1g0107 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 594 821 IPR003439 GO:0005524
Sto1g0107 1446 SUPERFAMILY ABC transporter transmembrane region 884 1191 IPR036640 GO:0005524|GO:0016021
Sto1g0107 1446 CDD ABCC_MRP_domain2 1207 1426 - -
Sto1g0107 1446 MobiDBLite consensus disorder prediction 818 840 - -
Sto1g0107 1446 ProSitePatterns ABC transporters family signature. 1345 1359 IPR017871 GO:0005524
Sto1g0107 1446 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 275 550 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0107 1446 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 239 1426 - -
Sto1g0107 1446 CDD ABC_6TM_MRP7_D1_like 273 558 - -
Sto1g0107 1446 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 888 1174 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0107 1446 CDD ABC_6TM_MRP7_D2_like 887 1186 - -
Sto1g0107 1446 Pfam ABC transporter 615 747 IPR003439 GO:0005524
Sto1g0107 1446 Pfam ABC transporter 1227 1373 IPR003439 GO:0005524
Sto1g0107 1446 Gene3D - 575 826 IPR027417 -
Sto1g0107 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1209 1442 IPR003439 GO:0005524
Sto1g0107 1446 SMART AAA_5 1235 1419 IPR003593 -
Sto1g0107 1446 SMART AAA_5 624 798 IPR003593 -
Sto1g0107 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 608 808 IPR027417 -
Sto1g0107 1446 PANTHER MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 239 1426 - -
Sto1g0107 1446 SUPERFAMILY ABC transporter transmembrane region 263 566 IPR036640 GO:0005524|GO:0016021
Sto1g0107 1446 MobiDBLite consensus disorder prediction 818 842 - -
Sto1g0107 1446 Gene3D ABC transporter type 1, transmembrane domain 245 568 IPR036640 GO:0005524|GO:0016021
Sto1g0107 1446 Gene3D ABC transporter type 1, transmembrane domain 856 1193 IPR036640 GO:0005524|GO:0016021
Sto1g0107 1446 Pfam ABC transporter transmembrane region 274 538 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0107 1446 Pfam ABC transporter transmembrane region 889 1137 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0107 1446 CDD ABCC_MRP_domain1 594 797 - -
Sto1g0107 1446 Gene3D - 1196 1442 IPR027417 -
Sto1g0107 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1203 1434 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0107 Sto-Chr1 709396 722217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0107 614 808 Calmodulin-binding Proteins AT2G36910 29.187 2.85e-19 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0107 K05674 - gmx:100814181 2253.79