Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0100 ATGGACGACTCTCCGAGGACCATCCTGTTCGACAAGTACGAGATGGGGAGGCTTCTAGGCCAAGGAAACTTCGCGAAGGTCTACTACGGCAGAAACCTCGTCACCAACGAAAGCGTGGCCATCAAAGTgatcaagaaagaaaagatcGAGCAAGGGAAAGTGAAGCTCGTGAAGCAAATCAAGCGTGAAGTCTCCGTCATGCGATTGGTCCAACACCCACACATCGTGGAGCTTAAGGAAGTAATGGCGACGAAAGCCAAGATCTTTCTCGTCATGGAATACGTCAAAGGCGGCGAATTGTTCGCTAAGGTCGCCAAAGGGAAGCTCCGGGAGGACGCCGCCAGAAAGTACTTCCAGCAGCTGATCTCCGCCGTGGATTTCTGCCACAGCCGCGGCGTCACCCACCGTGACCTGAAGCCGGAGAATCTCTTCCTGGACGAGAACGAGGACCTTAAAGTTTCCGACTTTGGGCTGTCGGCGTTGCCGGAGCAGCGCCGGAGCGACGGGATGCTCGTGACGCCGTGCGGGACGCCGGCGTACGTGGCGCCGGAGGTGTTGAAGAAGAAAGGCTATGATGGGTCGAAAGCAGATATTTGGTCTTGTGGGGTTATTCTCTATGCTCTGCTTTCTGGGTATCTTCCATTTCAAGGCGAAAATGTTATAAGAATTTACAAGAAAGCATTCAGAGCAGAGTACATATTCCCAGATTGGATTTCCTTAGAAGCCAAGAATTTGATCTCAAAATTACTGGTTGTGGATCCTGAGAAGAGGTATTCAATGGAAGATATCATGAGAGATCCATGGTTTCAATATGGGTTCATGGGCCCAATTGCATTTTCAATCAAAGAGGAATCTCACAATTTGCCTTCAGCTATAGAAGGATCTTTATTAGATAATGAAGATGAAGTAGGAGAAAAGGAAGAAGATGGTGGTGGAATTAGGAATAATAAGTCATCAAGTAGGCCTTTTTACAATGCATTTGAGATAATCTCATCATTGTCTCACGGGTTCGATCTCAGGAGTCTGTTTGAGACAAGGAAGAGGTCGCCCTCGATGTTCATAAGCAAATTCTCGGCCGCGGCCGTGGTGGGAAAGGTGGAGGCGGTGGCGAAGAAGTTGAATTTGAGGATAATGGGGAGGAAGGATTACATGGTGAGAATGCAAGGGACAAAGGAGGGGAGGAAGGGGAAATTGGGGATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAATTCTCGAAATCCGCCGGAGATACTTTGGAGTATGTGAAATTCTTGGATTTGGATGTGTGGGGTGGAAATCTAGGTGTACTATTATGGTATACAAAGAAGGGGTTGTTCTTAATTATAAGTAGAGATTTAGATTAA 1380 0.479 MDDSPRTILFDKYEMGRLLGQGNFAKVYYGRNLVTNESVAIKVIKKEKIEQGKVKLVKQIKREVSVMRLVQHPHIVELKEVMATKAKIFLVMEYVKGGELFAKVAKGKLREDAARKYFQQLISAVDFCHSRGVTHRDLKPENLFLDENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVIRIYKKAFRAEYIFPDWISLEAKNLISKLLVVDPEKRYSMEDIMRDPWFQYGFMGPIAFSIKEESHNLPSAIEGSLLDNEDEVGEKEEDGGGIRNNKSSSRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFISKFSAAAVVGKVEAVAKKLNLRIMGRKDYMVRMQGTKEGRKGKLGMTVEVFEVAPEVAVVEFSKSAGDTLEYVKFLDLDVWGGNLGVLLWYTKKGLFLIISRDLD 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0100 459 Pfam Protein kinase domain 13 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0100 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Sto1g0100 459 SMART serkin_6 13 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0100 459 Gene3D Kinase associated domain 1, KA1 323 436 - -
Sto1g0100 459 Gene3D Transferase(Phosphotransferase) domain 1 6 322 - -
Sto1g0100 459 ProSiteProfiles NAF domain profile. 319 344 IPR018451 GO:0007165
Sto1g0100 459 ProSitePatterns Protein kinases ATP-binding region signature. 19 46 IPR017441 GO:0005524
Sto1g0100 459 ProSiteProfiles Protein kinase domain profile. 13 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0100 459 SUPERFAMILY Protein kinase-like (PK-like) 6 272 IPR011009 -
Sto1g0100 459 PANTHER CBL-INTERACTING PROTEIN KINASE 16 4 437 - -
Sto1g0100 459 CDD CIPK_C 325 429 - -
Sto1g0100 459 PANTHER - 4 437 - -
Sto1g0100 459 Pfam NAF domain 323 377 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0100 Sto-Chr1 651266 652784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0100 6 444 CBL-interacting serine-threonine protein kinases AT5G10930 60.592 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto1g0100 Pkinase 6.1e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0100 - - lja:Lj3g3v2118210.1 637.106