Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0095 ATGGACAATGAGGAAATTCCATCAGTGCCCTCAACACCTGCAACACCAGGAACTCCTGGTGCCCCTCTTTTTGGTGGATTCAGGTCAGAGAGGAATAATCATGGGAATGGTTTTGGTAAGAAGAAATCACTTCTCAAGAGTTGCAAGTGTTTTAGTGTTGAAGAATGGACTTTAGAAGATGGAGCTTTACCTAAAGTCTCTTGCACATTGCCACCTCCTCCTATTCCTCTTGCCAAAAAGGTAGGAGCTGAGTTTATAGGCACTTTCATTCTCATGTTTGCTGGGACAGCCACTGCTATTGTGAACCAGAAGACACAAGGCTCTGAGACTCTCATTGGATGTGCTGGCTCCACCGGCCTAGCCGTCATGATCGTCATCCTCGCCACCGGCCACATCTCCGGCGCTCATCTCAACCCGGCCGTCACCGTTTCCTTCGCCGCATTAAAGCACTTCCCATGGAAACATGTGCCTATGTATATTGGTGCACAAGTTATTGCATCAATATGTTCTGCATTTGCATTGAAAGGGATATTTCATCCCTTCATGAATGGAGGAGTGACAGTTCCTTCAGGAGGATATGGTCAAGCCTTTGCTTTAGAGTTCATCATCAGCTTTAACCTCATGTTTGTTGTCACTGCTGTGGCCACTGACACAAGAGCTGTGGGAGAGCTTGCAGGAATCGCAGTGGGAGCCACTGTGATGCTCAACATACTCATAGCTGGACCAGCATCAGGAGGGTCAATGAACCCAGTAAGAACATTAGGCCCAGCAATTGCAGCAAATAACTATAAAGCCATATGGGTATATCTGATAGCTCCCATATTAGGAGCTTTAGGAGGAGCAGGTACCTACACTTTAGTGAAGCTTAGTGATGAACAAGAAGAAGATGCTAAGGGAAGGGCTTCAGCACCTGGAAGTTTTAGAATGTGA 930 0.4656 MDNEEIPSVPSTPATPGTPGAPLFGGFRSERNNHGNGFGKKKSLLKSCKCFSVEEWTLEDGALPKVSCTLPPPPIPLAKKVGAEFIGTFILMFAGTATAIVNQKTQGSETLIGCAGSTGLAVMIVILATGHISGAHLNPAVTVSFAALKHFPWKHVPMYIGAQVIASICSAFALKGIFHPFMNGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPASGGSMNPVRTLGPAIAANNYKAIWVYLIAPILGALGGAGTYTLVKLSDEQEEDAKGRASAPGSFRM 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0095 309 CDD MIP 79 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto1g0095 309 Pfam Major intrinsic protein 78 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto1g0095 309 ProSitePatterns MIP family signature. 136 144 IPR022357 -
Sto1g0095 309 PANTHER AQUAPORIN NIP2-1 3 301 IPR034294 -
Sto1g0095 309 Gene3D Glycerol uptake facilitator protein. 74 300 IPR023271 -
Sto1g0095 309 PANTHER BNAA02G36290D PROTEIN 3 301 - -
Sto1g0095 309 MobiDBLite consensus disorder prediction 1 29 - -
Sto1g0095 309 PRINTS Major intrinsic protein family signature 79 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto1g0095 309 PRINTS Major intrinsic protein family signature 118 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto1g0095 309 PRINTS Major intrinsic protein family signature 155 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto1g0095 309 PRINTS Major intrinsic protein family signature 199 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto1g0095 309 PRINTS Major intrinsic protein family signature 230 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto1g0095 309 PRINTS Major intrinsic protein family signature 267 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto1g0095 309 SUPERFAMILY Aquaporin-like 76 290 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0095 Sto-Chr1 600008 602767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0095 1 308 Major Intrinsic Protein MIP AT1G80760 77.742 1.19e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0095 K09874 - gmx:100815637 462.225