Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0087 ATGCCTTCAAGGCCATTCCCTCCAACTTCAAGTCCCAATTTTTTCACCAAAAACAGAATCCTCTTCCTAGCTCTCACCATTTCAGCCTCACTTGTCATTTTCTGTTCAATTCTTTACTTGCTTCACCATATCTGGCACTTTCTTAAACACAGACTCCAAACCAACCCATTTAATGAAAGTGCTTCTTTAAAGCTCCAAAGATTCTCATACAAAGAGCTAAAGCAAGCCACCAATGGTTTTCACACTGAAAATGTCATTGGTAAAGGTGGGTCTAGCACAGTTTTTAAAGGAACACTTAAGGATGGGGAATTTATTGCCATTAAGAGTCTAGACTCTTTGTCTTTACAATCAGAGCAAGAGTTTCAGAATGAGCTTCATATTCTTGGTGGATTAAGATCTCCTTTCCTTGTGACCCTTTTGGGGTATTGTGTGGAAAAGAAGAGGAGGCTCTTGGTGTTTGAATATATGCCTAAGAGAAGCTTGCAGGAGTTTCTCTttggagatgatgatgatgggagtTTGAGTTGGGAAAAAAGGTTTCTTGTGATAATGGATGTTGCTAGAGCTTTGGAATTCTTGCACCTTGGATGTGACCCACCAGTGATTCATGGGGATATTAAGCCGAGCAATGTTCTTCTTGATGATGAGTACCGTGGGAAGATTTCGGATTTCGGATTGTCAAGGATTAAAGTGGAAGAGGAGGGTGAGTTCAATGATGAGCTATGGAAGAGCCAAGAGTTTTCAGGTAATTTAACTGCAGAAAGTGCTGAAGCTATTGGTACTCCTATTGTTGAAAGTGTTAATGAAGTAGATTTTGCTCTAGCTTTGAAggcttcatcatcttcatccaaAAATTATAGCAGGTCAGgttttaatgttagagttttgAACTTGAATTCTTTGAGTAAGAATGCCAGTATTgcaagtgagaatgaaataaggAGTGGTAATACCAAGGGGAAGGAAATTTCAACTTTGGATGTTGATCGGGATGACGAGTTTTCCAGTATTGATCATAGTAAAGAGTTAAATGTTAATAATGCTTCCTCcaaagatgaagaagagaaggcAAATGAAAAACAATGGGGAAAAGACTGGTGGTGGAGGCAGGATGAAAGTGGAGAATTATGTAGTAAAGATTATGTCATGGAGTGGTTAGGGAGTCAGATTTGTGCATCAAACCCAGATTGGGATGAAGAAAAGAACAACATTCATAAGAGAACAGAACTGGAATACTCAAGCCCAACAGACAAACCAGATGATGCAGAAGACAACAAGGAAtcaaaggaaaatgaaataaCATCACCTCTCGGGAGGGTCTCCCCCTGCAACGAGCCTTGCAGTACCCGGGGGATTAATCACCAGATCTGCTCTGGTGGATATCCTGGTCCAAGAccaaaaaaggagaagaaaaatcTCAAGAAGAAGCAGAGGAAGATACAAGATTGGTGGAAAGAAGAGAAACTTTCTGAGTTAAGCAAGAAGAACTGCAAGCTGAAAATTCTCCAAACAAAGTGGAAGAAAGGGTTCAAAGTACCACATTTTGAATTGGGTAAAAGGTTTTATCTTTGCAGAAGAAGGAGCTTTCAAAGGGAGAGTCAAAACAATGATTGTGATCCAAATGAAGAGTTTAGTTTCAGAAAAAACTGGAGGAAGACAAGAAGTAGCCCTTCCATTGGTAGTGAAATGTGGAGTGGAGATAATTTAAGCAGCACAACCAGCATGAGAGGGACACTATGTTATGTAGCTCCAGAATATGGTGGTGGGTGTGAGTTCTTAATGGAAAAGGCTGACATTTATAGTTTTGGAGTTTTGATTCTTGTGATTGTTTCAGGAAGAAGACCATTACATGTTCTTGCATCCCCCATGAAGATGGAGAAAGCAAATTTAATAAGCTGGTGTAGACACTTGGCTCAATCTGATAATATTCTAGAACTTGTGGATGAAAAGTTGAAAGAAGATTACAATAAAGAGCAAGCAAGCTTGTGTATCAATATCGCACTTTCTTGCTTACAGAAAATTCCAGAGTTAAGACCAGATATTGGGGATATTGTTAAGATTTTGAAAGGGGATATGGATCTCCCATATCTTCCATTTGAGTTCTCTCCTTCTCCACCTTCCAAAGTGTACAGCAGATCAAGAAGAAAACAGAAGATACCATCTGTGTTATATCGCAGTGGTGTAGAATAG 2190 0.3708 MPSRPFPPTSSPNFFTKNRILFLALTISASLVIFCSILYLLHHIWHFLKHRLQTNPFNESASLKLQRFSYKELKQATNGFHTENVIGKGGSSTVFKGTLKDGEFIAIKSLDSLSLQSEQEFQNELHILGGLRSPFLVTLLGYCVEKKRRLLVFEYMPKRSLQEFLFGDDDDGSLSWEKRFLVIMDVARALEFLHLGCDPPVIHGDIKPSNVLLDDEYRGKISDFGLSRIKVEEEGEFNDELWKSQEFSGNLTAESAEAIGTPIVESVNEVDFALALKASSSSSKNYSRSGFNVRVLNLNSLSKNASIASENEIRSGNTKGKEISTLDVDRDDEFSSIDHSKELNVNNASSKDEEEKANEKQWGKDWWWRQDESGELCSKDYVMEWLGSQICASNPDWDEEKNNIHKRTELEYSSPTDKPDDAEDNKESKENEITSPLGRVSPCNEPCSTRGINHQICSGGYPGPRPKKEKKNLKKKQRKIQDWWKEEKLSELSKKNCKLKILQTKWKKGFKVPHFELGKRFYLCRRRSFQRESQNNDCDPNEEFSFRKNWRKTRSSPSIGSEMWSGDNLSSTTSMRGTLCYVAPEYGGGCEFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKMEKANLISWCRHLAQSDNILELVDEKLKEDYNKEQASLCINIALSCLQKIPELRPDIGDIVKILKGDMDLPYLPFEFSPSPPSKVYSRSRRKQKIPSVLYRSGVE 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0087 729 ProSiteProfiles Protein kinase domain profile. 80 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0087 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Sto1g0087 729 MobiDBLite consensus disorder prediction 406 433 - -
Sto1g0087 729 SUPERFAMILY Protein kinase-like (PK-like) 59 712 IPR011009 -
Sto1g0087 729 MobiDBLite consensus disorder prediction 434 455 - -
Sto1g0087 729 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Sto1g0087 729 MobiDBLite consensus disorder prediction 406 477 - -
Sto1g0087 729 Gene3D Phosphorylase Kinase; domain 1 45 155 - -
Sto1g0087 729 Gene3D Transferase(Phosphotransferase) domain 1 156 263 - -
Sto1g0087 729 Gene3D Transferase(Phosphotransferase) domain 1 545 694 - -
Sto1g0087 729 MobiDBLite consensus disorder prediction 334 361 - -
Sto1g0087 729 Coils Coil 340 360 - -
Sto1g0087 729 SMART serkin_6 80 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0087 729 PANTHER OS08G0275200 PROTEIN 1 718 - -
Sto1g0087 729 Pfam Protein kinase domain 570 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0087 729 Pfam Protein kinase domain 80 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0087 729 PANTHER OS07G0586332 PROTEIN 1 718 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0087 Sto-Chr1 552907 555215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0087 559 688 Receptor kinase-like Gene Family AT3G58690 31.852 2.03e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Sto1g0087 Pkinase 1.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0087 - - ccaj:109812677 935.25