Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0083 ATGGGGGTATACCTCAGCACTCCAAAAACAGAGAAAGCCTCTGAGGATGGTGAGAACGACAAGCTTCGCTACGGTTTGTCTTCCATGCAGGGGTGGCGTACAACCATGGAAGATGCTCCTTGTGTTATGTTACAAAATTACTGTCTATTCAATGGTGCTTacaaaattttcttcttttctattgCTTGCCAGCATGCAGCCCATCTAGATTTGGACAAGTCAACATCTTTCTTTGGTGTTTATGACGGCCATGGAGGTAAAGCTGTTGCCAAATTTTGTGCCAAATATCTACACCTACAGGTGCTTAAGCATGAAGCTTATTTAGCTGGAGACTTGGGCACGTCTTTACAGAAAACTTTTCTCAGAATGGATGAAATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAATATAGAAAAGTTGTCGGGTATGCTCGAGGGCTTTATATGGTCTCCCAGGACTGAACACAATGCCCATTCTGATGATTGGGTTCTTGAGGAGGGCCCCCATTCTGATTTTACTGGTCCAAACTCTGGATGCACGGCTTGTGTGGCAGTAATTCGAGGCAAACAACTCATTGTTGCAAATGCTGGTGATTCTCGCTGTGTTATATCAAGGAAGGGCCGGGCACATAATTTGTCTAAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGAGAGGATTCATAAAGCTGGTGGTTTCATTCAAGTTGGGCGGGTTAATGGAAGTCTAAATTTGGCTAGAGCAATTGGGGACATGGAATTCAAGCAAAACAAGTCTTTGCCTGCTGAAAAGCAGATTGTGACTGCTGATCCGGACATAACTTCTGTTGAGCTTTGCGAAGATGACGAATTTCTGGTAATAGCTTGTGATGGGATATGGGACTGCATGTCAAGTCAACAGCTTGTGGACTTCATAGGTGCACAGTTAAAGACGGAAAATAAACTCTCTGTGGTTTGTGAGAAAGTGTTTGATAGGTGCTTGGCACCTGCATCCGGTGGCGAAGGATGTGACAACATGACTATGATTTTGATTCAATTCAAAAGTTTTTCAAGTCCAGATGAAAGTTTAGCTCAATCTTCCAatgtggataaaagttcagcTCAAGCATCCAGCGGTGATGAAAGTTTAGCTAAAGCATGCAATGGTGATAGAAGTTCAGTTCAAGCATCTGCCGATAAAAATTCAGCCCAAGAATCCAATTCTGGTAAAAGTTCAGCTCAACCATCCCCTGCTGATAATAGTCTAATTCAGCCGTCCAAGGCTGATAATAGTTTGGCAGAATCAAAGTGA 1308 0.4228 MGVYLSTPKTEKASEDGENDKLRYGLSSMQGWRTTMEDAPCVMLQNYCLFNGAYKIFFFSIACQHAAHLDLDKSTSFFGVYDGHGGKAVAKFCAKYLHLQVLKHEAYLAGDLGTSLQKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPRTEHNAHSDDWVLEEGPHSDFTGPNSGCTACVAVIRGKQLIVANAGDSRCVISRKGRAHNLSKDHKPDLEVERERIHKAGGFIQVGRVNGSLNLARAIGDMEFKQNKSLPAEKQIVTADPDITSVELCEDDEFLVIACDGIWDCMSSQQLVDFIGAQLKTENKLSVVCEKVFDRCLAPASGGEGCDNMTMILIQFKSFSSPDESLAQSSNVDKSSAQASSGDESLAKACNGDRSSVQASADKNSAQESNSGKSSAQPSPADNSLIQPSKADNSLAESK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0083 435 SUPERFAMILY PP2C-like 3 353 IPR036457 -
Sto1g0083 435 CDD PP2Cc 23 352 IPR001932 -
Sto1g0083 435 PANTHER PROTEIN PHOSPHATASE 2C 1 43 IPR015655 GO:0004722|GO:0006470
Sto1g0083 435 PANTHER PROTEIN PHOSPHATASE 2C 64 370 IPR015655 GO:0004722|GO:0006470
Sto1g0083 435 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 43 - -
Sto1g0083 435 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 64 370 - -
Sto1g0083 435 Pfam Protein phosphatase 2C 163 338 IPR001932 -
Sto1g0083 435 Pfam Protein phosphatase 2C 23 128 IPR001932 -
Sto1g0083 435 MobiDBLite consensus disorder prediction 361 435 - -
Sto1g0083 435 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Sto1g0083 435 Gene3D - 1 353 IPR036457 -
Sto1g0083 435 SMART PP2C_4 13 350 IPR001932 -
Sto1g0083 435 ProSiteProfiles PPM-type phosphatase domain profile. 23 352 IPR001932 -
Sto1g0083 435 SMART PP2C_SIG_2 53 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0083 Sto-Chr1 530181 535801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0083 1 366 PP2C-type Phosphatase Gene Family AT2G25070 69.837 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0083 K17499 - gmx:100499713 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0083 1 530181 535801 Sto1g0083 1 530181 535801 ECH