Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0082 ATGACGGCGACGGTGGGGATTGCTTCTTCGGGAGGATATCGGCGGCGGTCGTCGTTAGAGAGTTCTTTGCGGCAAAGGGGAAATGGAAGAATGGAAGTCGCTTCCATGGACTCACTCTCCAGACGTCCCTTTCGAAACAACTTCCAACCCCTTTCTCACATCCACATTCTCCCTTCTGAAAATGACCCTTCTACCCCTCTCGTCCACATCCACCACAATGGCCTCACCAAGCACTTCTCCCCTCACCACGTTTCCTCCGCAATGCTCTCCCTACACAAACGCCTAATGCAACATCCCAAACCCTACTTCCTCATCCCCGCCTACTTCTCCTTCCTCCACCGAATCTCCACGCGCCGCGCgttgtcttcttcttcctcctccgcCGACGTCCACGTCACTCTCGTCGACGAACCCTTCGCCGCCTCCGTCGCCTACCGCCTCCACCTCAAAGCCTCAAGAAACCCTTACACCAACGTTCTTGTCTTCGATCTTGGCGCTTCTTCGTTACAAGTCTCGATTCTCACGAACGAGGAAAACCCTCGCCTCAGAGTCATCTTCACGTCGGGTCCCACGGATTTGGGAGGCGAGGATTTTACGAACCGGCTGTTGAACTCGCTCGCGGAGGAGTTCAGAATCAAGCACGGGAAGGATATTAGTGGAAACCCTAGCGCCTTGAAGAGATTGCGGCGCGCGTGTGAGCGAGCGAAGAGGTTTCTTTCGTCGCAGACGCGTGCGGGGATCGAGATTGATTCGTTATACGAAGGTGTTGATTTCCGCTCGGAGATTTCGCGGTCAAGATTCGAGGGTTTGAATAAGGATTTGTTCGACAAGTGTATTGAGAAGGTGAAGCAGAGTATTGAGCGTGTGGAAATGGACGAGACTGAGTTTGAAGACGTCGTTTTAGTGGGTGGCTCGTCGTTTACTCCCAAATTACAGGAACTACtgaaggatttcttcgattTGGAGGAGCTACACGTGAGTATACCACCGAATTCGGCTGTGTTATATGGCTCTATTAAGATAGGTGCGTCTTTGAAACGCTTAGGTAGAGAAGAGGCGTCCATGTTTGAAGAAGAATTGCTTCCATTAGGGATAGGTATTGAAATGAATGGTGGGGTAATGAATGAGATGATTCCAATGAATTCAAGGTTACCCACAGAGAGTTTTCAAATTGTTTCACCAGCATGCAACAATCAGACAAGTTTGCTTATCAAAGTGTATCAAGGAGAAAGGGCAAGAACAGAGGATAACTACTTTGTGGGGACATATGAGGTGAAGAACATACCAGCTGGAGCAAGAGGGTGGTATGAGATCAATGTGTGTGTGCAAGCTAAGGCAAAAGGTGTGATTGAAGTGTCTGCTTATGATATGATTGCAGGAGCAGAAATGGGTGTTACTAAGAGAATGAGAAGAGAACTGAGCCATGAGGAGGTTGAGAGAATGATGGAAGATGCAGAGAGGTATAAGGAAGAGGATGAGGTGGTGAAGAAGGCAAAGGCAAAGAGCTTCTTGGAGGGGTATGTTTATGTTGTGATGAGGAACAGCATGAGGAAGGCAAAGGCTAGGAACTGGTGGAAACTGAGTGCTTCAGAGAAAAACAAGGCTGAGAAGGAAATTAATGAGACAATTGAGTGGGTGGATGGAGACTTGGGTAATGCAGAACAATATGAAGCCAAGTTGAATGAGCTTCAAGTATTGTGGAAGTCAATCAATGATAAGTTGAACAGTTTTGACTGCAAGGTTCTTTAG 1749 0.4711 MTATVGIASSGGYRRRSSLESSLRQRGNGRMEVASMDSLSRRPFRNNFQPLSHIHILPSENDPSTPLVHIHHNGLTKHFSPHHVSSAMLSLHKRLMQHPKPYFLIPAYFSFLHRISTRRALSSSSSSADVHVTLVDEPFAASVAYRLHLKASRNPYTNVLVFDLGASSLQVSILTNEENPRLRVIFTSGPTDLGGEDFTNRLLNSLAEEFRIKHGKDISGNPSALKRLRRACERAKRFLSSQTRAGIEIDSLYEGVDFRSEISRSRFEGLNKDLFDKCIEKVKQSIERVEMDETEFEDVVLVGGSSFTPKLQELLKDFFDLEELHVSIPPNSAVLYGSIKIGASLKRLGREEASMFEEELLPLGIGIEMNGGVMNEMIPMNSRLPTESFQIVSPACNNQTSLLIKVYQGERARTEDNYFVGTYEVKNIPAGARGWYEINVCVQAKAKGVIEVSAYDMIAGAEMGVTKRMRRELSHEEVERMMEDAERYKEEDEVVKKAKAKSFLEGYVYVVMRNSMRKAKARNWWKLSASEKNKAEKEINETIEWVDGDLGNAEQYEAKLNELQVLWKSINDKLNSFDCKVL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0082 582 PANTHER HEAT SHOCK PROTEIN 70KDA 64 575 IPR013126 GO:0005524|GO:0140662
Sto1g0082 582 SUPERFAMILY Actin-like ATPase domain 156 343 IPR043129 -
Sto1g0082 582 Gene3D - 157 324 - -
Sto1g0082 582 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 64 575 - -
Sto1g0082 582 MobiDBLite consensus disorder prediction 1 33 - -
Sto1g0082 582 Coils Coil 553 573 - -
Sto1g0082 582 Gene3D - 473 576 IPR029048 -
Sto1g0082 582 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 347 468 IPR029047 -
Sto1g0082 582 Pfam Hsp70 protein 67 573 IPR013126 GO:0005524|GO:0140662
Sto1g0082 582 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 500 574 IPR029048 -
Sto1g0082 582 Gene3D Actin; Chain A, domain 4 196 276 - -
Sto1g0082 582 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 358 497 IPR029047 -
Sto1g0082 582 PRINTS 70kDa heat shock protein signature 101 121 - -
Sto1g0082 582 PRINTS 70kDa heat shock protein signature 167 177 - -
Sto1g0082 582 PRINTS 70kDa heat shock protein signature 296 312 - -
Sto1g0082 582 PRINTS 70kDa heat shock protein signature 328 348 - -
Sto1g0082 582 PRINTS 70kDa heat shock protein signature 354 373 - -
Sto1g0082 582 Coils Coil 471 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0082 Sto-Chr1 522679 526003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0082 66 574 Calmodulin-binding Proteins AT1G16030 43.738 9.92e-135 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0082 K03283 - cit:102625591 396.741