Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0071 ATGGAGTCAAGCATGATGATGAGTGtaaggatgatgatgatgtttgTATGTGTTTCATCAATAGTGTGGTTCCATGGATATGGAAGCACAATTAATAATATTGTGCATGTATCGAAGGAGGGGAATGGAGATTACACAAGTGTGAGTGAAGCCATAGCCCAAGCTCCAAGCATGGCCACACAGCAATACATAATCCATGTTGGAAGTGGGAGTTATGAAGAGTATGTCCATATTCCATCTGACAAAACTAACATTGTCCTCATTGGCAAAGGTCCTGATCAAACTAAAATTGTTGGCTACGATAAGGGTACCACATTAGACATAGATGGGAATGATTTCATGGCGAAAGACATAGGAATAGTGAACTTAGGAGGGCCAAGCGGAGGAGGAGGCATGGCGACAGCCGTCCGCAACGCAGCCAACAACAGCATTTTCTTCCAATGCTCCATCCAAGGCTTCCAAGACACTCTCTGGGCCGCCTCCGGCCGCCAATTCTACAAGAACACCGTCATCTCCGGCACCGTCGACTTCATCTTCGGCGGCGCCTCCGCCCTCTTCCAAGGCTGCACTCTCCAGGCGCGCCTCCGCCCCTACGTGACCTTCACCGCCCAGGCACGCGAGTCCCCCGCCTTCTCCGCATTCTCCTTCGGGCATTGCAAATTCACTATGGCTCCCGAGGACGCGCCCCGAATCTCACAGGTCAATGCCACCTTGGGTAGGCCTTGGAGGGCCTATTCCACCGTCGCTATCATTTTTTCTTATATTGACTCTATGGTGGGCCCCCGGGGATGGGAGGAGATGCCTGGTGTGCCTACCGATAAGGTTACGTTTGTCGAGTTTCAGAATGTTGGGCCTGGCTCTGACACTCAGTACCGGGTCAAATGGCCCGGTGTTAGAAGGCTTCGCGGCCTGGATGAGGCCCACTCTTTTACTGCTTCCGGCCTCTTGGATGCTGCCTCTTGGATCCCTTCCAAGGGTGTTCCCTATGACGAGCTTTAG 999 0.5135 MESSMMMSVRMMMMFVCVSSIVWFHGYGSTINNIVHVSKEGNGDYTSVSEAIAQAPSMATQQYIIHVGSGSYEEYVHIPSDKTNIVLIGKGPDQTKIVGYDKGTTLDIDGNDFMAKDIGIVNLGGPSGGGGMATAVRNAANNSIFFQCSIQGFQDTLWAASGRQFYKNTVISGTVDFIFGGASALFQGCTLQARLRPYVTFTAQARESPAFSAFSFGHCKFTMAPEDAPRISQVNATLGRPWRAYSTVAIIFSYIDSMVGPRGWEEMPGVPTDKVTFVEFQNVGPGSDTQYRVKWPGVRRLRGLDEAHSFTASGLLDAASWIPSKGVPYDEL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0071 332 PANTHER PECTINESTERASE 17 331 - -
Sto1g0071 332 PANTHER PECTINESTERASE 17 331 - -
Sto1g0071 332 Pfam Pectinesterase 35 317 IPR000070 GO:0030599|GO:0042545
Sto1g0071 332 Gene3D - 33 332 IPR012334 -
Sto1g0071 332 SUPERFAMILY Pectin lyase-like 29 330 IPR011050 -
Sto1g0071 332 ProSitePatterns Pectinesterase signature 2. 171 180 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0071 Sto-Chr1 449099 451581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0071 35 329 Carbohydrate Esterase AT4G02300 36.452 9.51e-66 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0071 K01051 - gmx:102665195 348.977