Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0070 ATGAAGGACGAAGCAGCAGGAGAGGTTCCTGTAGCATTTGTGGTGAGATCCAACGGTTACACTGACACCACCGAGGATGACATCAAGCAGTTTATCTCAAAACAGGTGGTGTTTTATAAGAGAATAAGCAAAGTGTTCTTCATTGATGCAATTCCCAAGTCACCATCAGGCAAAATCTTGAGAAAGGATCTAAGAGCAAAACTTGCTGCTGCTGCTTAA 219 0.4292 MKDEAAGEVPVAFVVRSNGYTDTTEDDIKQFISKQVVFYKRISKVFFIDAIPKSPSGKILRKDLRAKLAAAA 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0070 72 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 69 - -
Sto1g0070 72 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 1 69 - -
Sto1g0070 72 Gene3D - 1 71 IPR045851 -
Sto1g0070 72 SUPERFAMILY Acetyl-CoA synthetase-like 2 69 - -
Sto1g0070 72 Pfam AMP-binding enzyme C-terminal domain 2 58 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0070 Sto-Chr1 442330 443210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0070 3 64 Monolignol Biosynthesis Gene Families AT4G05160 59.677 6.42e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0070 K01904 - gmx:547944 112.079