Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0069 ATGAAGCTTCAAGCAAGTGGTTCTAGTTATAATATAAGACTGGTCATAAAACCCGAAGTTCAGAAGATGGGTTCTGCAGAAGATAAAATAGACCTTGATTCTGATGAGGAGATTCCATTTCGATCCTCACCATCAGCGAGGAAAGTacataattttgattttgaggCGACACATGTACTTGCTCCTGTAAATTTGGCCAGCTCATCCATCTTTAAGCGAATAAAGATACGACCTATCAGGAGCCTATATGTTGTCTTAATTAAAGCAAAGATCAACGTCTTGCTTCCATTTGGTCCCTTGGCCATATTGCTTCATTACGTAACAGGAAAGCATGGATGGGTGTTCTTTTTCAGCTTATTGGGTATTACTCCTTTGGCAGAACGTCTGGGATATGCTACTGAGCAGCTTGCATTGTATACAGGACCAACAGTTGGGGGTCTGCTGAATGCCACATTTGGCAATGCAACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGAATGATTAGGGTTGTTCAGCAATCTTTATTGGGCTCAATTTTGTCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGTGGGATTGTCCACTACAAAAAGGTTCAGGTTTTTAACAAGGCATTAGCTGTTGTAAATTCTGGGTTGCTCTTGATGGCTGTAATGGGAATATTGTTTCCTGCCGTGCTTCACTTTACTCATTCAGAGTTAAGAAGTCAGAATAATCTTTATAGTCCTATTGAAGAGGAAGTTGATAGTTGTGAAAATAATGATGAGGAAGAAGCTGAGTTAACTCAATGGGAAGGGATAGTCTGGCTTGCTGTTTTGACAATTTGGGTGTCTGTATTGTCTGGATACCTTGTGGATGCCATACAGCTAGTATATTCCTATCATTCTCTGTTTTCATTGTGTTGTTGGtttgattttatgttttttGTCTTTGGTATCTTGCAGGGGGCATCTGAGTCACTGAATATGCCTGTGGCTTTTATTAGTGTCATCTTGCTTCCAATTGTAGGCAACGCTGCAGAACATGCAAGTGCTATCATGTTTGCCGTGAAGGACAAGCTTGATATCACACTCGGAGTTGCCATTGGCTCATCTACACAGATATCTATGTTTGTGATCCCCTTCTGTGTCGTTGTTGGGTGGTGCATGGGGAAAGAAATGGACTTGAATTTTCAACTCTTTGAAACCGCCACACTTTTCATCACTGTGCTTGTGGTAGCATTTATGTTGCAGGAAGGGACCTCAAATTATTTCAAAGGCCTGATGCTTATTCTCTGCTACCTTATCGTTGCTGCCAGTTTCTTTGTACATGTAGACCCTAAAGATGGTGATGACTAG 1353 0.3991 MKLQASGSSYNIRLVIKPEVQKMGSAEDKIDLDSDEEIPFRSSPSARKVHNFDFEATHVLAPVNLASSSIFKRIKIRPIRSLYVVLIKAKINVLLPFGPLAILLHYVTGKHGWVFFFSLLGITPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKVQVFNKALAVVNSGLLLMAVMGILFPAVLHFTHSELRSQNNLYSPIEEEVDSCENNDEEEAELTQWEGIVWLAVLTIWVSVLSGYLVDAIQLVYSYHSLFSLCCWFDFMFFVFGILQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAVKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPKDGDD 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0069 450 PANTHER VACUOLAR CATION/PROTON EXCHANGER 314 447 - -
Sto1g0069 450 PANTHER VACUOLAR CATION/PROTON EXCHANGER 239 294 - -
Sto1g0069 450 PANTHER VACUOLAR CATION/PROTON EXCHANGER 23 239 - -
Sto1g0069 450 Gene3D - 142 441 IPR044880 -
Sto1g0069 450 Pfam Sodium/calcium exchanger protein 113 232 IPR004837 GO:0016021|GO:0055085
Sto1g0069 450 Pfam Sodium/calcium exchanger protein 272 437 IPR004837 GO:0016021|GO:0055085
Sto1g0069 450 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 23 239 IPR004713 GO:0006812|GO:0008324|GO:0016021
Sto1g0069 450 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 239 294 IPR004713 GO:0006812|GO:0008324|GO:0016021
Sto1g0069 450 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 314 447 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0069 Sto-Chr1 435272 440409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0069 72 448 Antiporters AT3G13320 64.059 9.34e-180 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0069 K07300 - zju:107428192 628.246