Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0068 ATGCTTCTAGTTCCTGGATGTGCCTTCTTTCTTGGTGGGATTGTCCACTCCAAAAGGCTTCAGGAAGCTGCTGGTGTGAATTCTAGGTTGATTTTGATTTCTCTAATGGGAATATTGTTTCCTACCATGCTTCACTATACTCACTCAGAACTTCATTCCAAAATGTCAGAGTTATATCTATCCAGATTTATCAGCTTCATAATGCTAGTGGCATATGCCATTTACCTCCCTTTTCAACTAAATAGTCAGCAGCAAAATCTTCATACTTTTAAGAGGGGGCCATCGGAGTCATTGAACATACCAGAGACTTTTGTAGCTGTTGTGTTGTTTCCAATTGTGGAACATACAAGTGCTATCATGTCTGCCATTAATGACAAGCTGGATGTCGCGCTTGAAGACACCATTGGATCAGCTGTACGGCTAGTTATGTTTGTAATGCCGTGGAGTGTTCTTGTTGGGTGGTGTATGGGAAAAGAAATGGACTTGAATTTTCAACTCATTGAAATTGCTGCTCTTGTTATTCCTGTCATTATAGTGGCATTTCTATTGCAGACTTTGAAATTGCCGCTACTTCACTTGGTTGTGAGTTCTAACTTGTGTACTGGTCTAATGGGTCCTTTAGAAGATAAAATAGACCTTGATTCTGATGAGGAGGTTTCATTTCGATCCTCACCATCAGCTGCAAAAGTACATAATTTTGATTTCGAGGCAACACATGTACTCGCCCCTGGATGGGTGTTCTTTTTCAGCTTATTGGGTATTACTCCTTTGGCAGAGCGTTTGGGATATGCTACTGAGCAGCTTGCATTGTATACAGGACCAACAGTTGGGGGTCTGCTGAATGCCACATTTGGCAATGCAACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGAATGATTAGGGTTGTTCAGCAATCATTATTGGGCTCAATTTTGTCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGTGGTATTGTCCATAAGAAGGTTCAGGTTTTTAACAAGGCATCTGCTGTTGTAAATTCTGGGTTGCTCTTGATGGCTGTAATGGGAATATTGTTTCCTGCCGTGCTTCACTTTACTCACTCAGAGGTTCATTTTGGGAAATCGGAGCTATCTCTATCCAGATTTAGCAGCTGTATAATGCTAGTGGCATATGCTAGCTACCTGTTTTTTCAGTTAAGAAGTCAGAATAATCTTTATAGTCCTATTGAAGAGGAGGGTGATAGTTGTGAAAATAATGATGAGGAAGAAGTTGAGTTAACTCAATGGGAAGCAATAGGCTGGCTTTCTGTTTTGACAATATGGGTATCTATATTGTCTGGATACCTTGTGGATGCCATTCAgGGGGCATCTGAGTCACTAAATATGCCTGTGGCTTTTATTAGTGTCATCTTGCTTCCAATTGTTGGCAACGCTGCAGAACATGCAAGTGCTATCATGTTTGCCGTGAAGGATAAGCTTGATATTACACTCGGAGTTGCTATTGGATCATCTACACAGATATCTATGTTTGTGATCCCCTTCTGTGTCGTTGTTGGGTGGTGCATGGGGAAAGAAATGGACTTGAATTTTCAGCTCTTCGAAACCGCCACACTTTTTATCACTGTGCTAGTGGTAGCATTTTTGTTGCAGGAAGGGACCTCAAATTATTTCAAAGGCTTGATGCTTATTCTCTGCTACCTTATCGTTGCAGCCAGTTTCTTCGTACATGTGGACCCTAAAGATGATGATGACTAG 1755 0.4074 MLLVPGCAFFLGGIVHSKRLQEAAGVNSRLILISLMGILFPTMLHYTHSELHSKMSELYLSRFISFIMLVAYAIYLPFQLNSQQQNLHTFKRGPSESLNIPETFVAVVLFPIVEHTSAIMSAINDKLDVALEDTIGSAVRLVMFVMPWSVLVGWCMGKEMDLNFQLIEIAALVIPVIIVAFLLQTLKLPLLHLVVSSNLCTGLMGPLEDKIDLDSDEEVSFRSSPSAAKVHNFDFEATHVLAPGWVFFFSLLGITPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHKKVQVFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSELSLSRFSSCIMLVAYASYLFFQLRSQNNLYSPIEEEGDSCENNDEEEVELTQWEAIGWLSVLTIWVSILSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAVKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPKDDDD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0068 584 Pfam Sodium/calcium exchanger protein 96 185 IPR004837 GO:0016021|GO:0055085
Sto1g0068 584 Pfam Sodium/calcium exchanger protein 245 399 IPR004837 GO:0016021|GO:0055085
Sto1g0068 584 Pfam Sodium/calcium exchanger protein 434 571 IPR004837 GO:0016021|GO:0055085
Sto1g0068 584 PANTHER VACUOLAR CATION/PROTON EXCHANGER 1 85 - -
Sto1g0068 584 PANTHER VACUOLAR CATION/PROTON EXCHANGER 93 202 - -
Sto1g0068 584 PANTHER VACUOLAR CATION/PROTON EXCHANGER 244 582 - -
Sto1g0068 584 TIGRFAM caca2: calcium/proton exchanger 244 574 - -
Sto1g0068 584 TIGRFAM cax: calcium/proton exchanger 244 574 IPR004798 GO:0006816|GO:0015369
Sto1g0068 584 Gene3D - 1 199 IPR044880 -
Sto1g0068 584 Gene3D - 419 575 IPR044880 -
Sto1g0068 584 Gene3D - 274 412 IPR044880 -
Sto1g0068 584 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 85 IPR004713 GO:0006812|GO:0008324|GO:0016021
Sto1g0068 584 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 93 202 IPR004713 GO:0006812|GO:0008324|GO:0016021
Sto1g0068 584 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 244 582 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0068 Sto-Chr1 423103 431996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0068 242 582 Antiporters AT3G13320 77.907 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0068 K07300 - fve:101299212 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0068 1 423103 431996 Sto1g0068 1 423103 431996 ECH