Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0058 ATGAAATTcctattgttgatccttcgcTTGTATGTTGCTTCTGCTTTGAGCTCTGATGGTTCCACTCTCTTGTCGCTGTCAAAGCACTGGACTTCTGTGCCTCCTTCCATCAATTCAAGCTGGAAGCCCTCTGATTCCACTCCTTGCTCATGGCTAGGAGTACAATGTGACCATGACAGCCGTGTGGTCTCCCTTGACCTCACTTCTTCCACCATTTTTGGTCAACTTGGGTCAGAAATTGGAAGCTTAAATCGCTTGCACACCATTGTGTTGTCCCGAAATGGTTTCTCCGGAAGAATACCCCCTGAGTTAGGCAATTGCAGTCTGCTTGAGAGTATCAACTTTTCTAGCAACTCCTTTAGTGGACAAATACCATATTCCTTGAAAAAGTTGCGAAATTTGCGCTATCTCAACTTTTATTCTAATCAACTCACTGGTGGAATTCCTGACTTCTTGTTTCAAATTCCTCATCTACAACAAGTGTACCTGTACGACAATAGCATTAGTGGTCATATCCCCTCCAATATTGGAAACGCCACTGAATTGTCAAAGTTGTATCTTTCTGTTAATTACTTGTCAGGGATCATTCCCTCTTCCATAGGTGAAATTTCTTTCAAATTTGGCAAGACCCTGACCATTCTGGATGTATCCCAGAACAATTTGACCGGAAGCATAGGTTTTCTCGAGGGACATGATTCATTAGAAGAAGTCAATGTTTCATACAATTCTTTTGTTGGTGTTGTACCACAAGGGGCATTGAAATATCTGCATTCTTCTCCCACATCATTCTTGGGCATTCCTGGTCTATGTGTCCCTTGTTCAACTTTATTTGAGTTGAGTGGCACTAGCACTTTCTACTTGAAGCCATGTGACAATTGCAAATTCAAATATGAATCAGGAAAACACATCTTTAACGTTGTAATTCGGATAGTAGAAGTTGGATCCCCAATGCTAGTTATTATAGTTGCTATTTTTCTGGTGAGGTTCATTCGCATGCGTCTTTCTGACCAAATATCAATGGAGGACGTCATTGCCTATAATGAAGAAGAGCAAGAGCTGTGGCCTTTAAGGGGAGAACATAACTTAGAAAATGGAGTTATTGACCTAAAGGGGGAGGTGATGAGGGCTACGGAGAATCTAGATGATCCATATATAATTGGGAGAGGAGGGCATGGGACAATTTACAAAGCCCAATTAGATTTTGGAGTTTTTGCTGTAAAGAAGATTGTTGCAAAGagcaaaagaaaaagattaagCATGGTTAGAGAAATTAAAATCATTAAGAAGATTAGGCATCAAAATGTTGCAAGATTTCTAGGCTACTGGATAGGAGATGATTACGGTCTAATCTTCCTCAGGTACATGGAAAATGGGAGCCTTCATGACATTTTGCATGAAAATGATGCACCACATTCTTTAGATTGGACTGTGCGCTATAAGATAGCTGTCGGAGTTGCAAAGGGACTGGAATATCTCCATCATGGATGTGATCCTCCCATACTGCATCGAGACATCAGCCCAAAGAATATACTTCTTGATTCTGATATGGAGCCTTATATTACTGATTTTGGTATTTCCATTGCTTTGAATCAGCCCTCTACTATGATGCAAATGCGGTCGACATATCATCTAGGAACACGTGGGTTTATAGCACCAGAGATTGCATCTACAATAGTATCGAGTAGTGAATCTGATGTATATAGTTATGGTGTAGTTTTGCTTGAGCTCATGACCAGAAAGAAAGTATTAGATTCTTTATTTGAGGAGAAGGAAACCACTTTAGTAGGGTGGTTTAAATCTGTATGGAGGGAAACCAGAGAAATTGAAGAGATTGTTGATTCAAACCTATCAAGGGAACTTTCAGATTTAAAAGTAGTGGTACAGGTTATCAAAGTGCTTTTGGTGGCCTTGATATGTACACAGACGGATCCTCGGAAGAGACTGAAAATGAGAGATGTTATCAAAATCTTTGAAGCACCCACAGTTCAAGGAATTCATATTCAAAATGACAGAACTTCATTTCATTTGGGGAGTGCTCTTTCTACTgctctctcttctatttttaTGCAGGCTCGAACCATTGTTATAAAAGGCCTTCCCAAAGACATAAAATGGAGAGAACTGCCGAATCTACTGAGATGGTTTCCTGGATACGAAGTTTCTCAACTGAGTTTGGTACATGAAAAACCCATAGCTTATGCTCTCTTCAACACAGCACAACAAGCAGTTGCAGCCAAAGATAGTCTTCAGGACTTGGTCTTTGATGCAGAGACAAAGTCAGTGCTACGCTCACAGATTGCTGATAAACAATATTTTGTAAAAAGAGGTGCATTTGATCATGGCAAAGGATTATGCACTGCTGTGGATTACCCTCACATTGGTTATGGAAGTGCAAGTCCTTCTTCTCCTAATTATCTCCCATCCGATGTTCAGGGAATATTCATGGCTTCACCTTCATATCATCCATATGTAAGCCTTCATGATGTTTTGCATGTACGAGATCCGATGTTAACCTTGGCGTGGAATGTCCGCTATAAGATAGCTGTTGGAATTGCACATGAACTAGCATATCTCCATCACCACTGTGATCCTCCCATACTGCATCACTATATCAATCCAAAGAACATATTTCTTGATTTTGACATGCAACCTCACATATGTGATTTTGGTGTTTCCAGGACTTGGAATCAGTCCTCTTGTGCAGCAGGTGAGCCTTCTACACAtgcttgttttccttctacagAGAATGGATATATGAGAGAGGAGGGTGTTGCATGTGATGTATATAATTATGGGGTAGTTTTGGTTGAACTAATAAGTGGGAAGAAGGTATTAGATTTGGATCCCTCACTTCTAAAGGATACTACTTTAGTGGAATGGGTTCGATGTACTTGGATGGAAACAAGAGATGTCGATAAAATTGTTGATTCAAGGCTTGCATGGGAGTTGGATAATTTGAATGTGGAGGTAGTACAAGTTACTGAAGTGATTTCTGTTGCTTTGTTATGTACTGACAAGGATCCACACCAGAGACCCACAATGAAGACTGTTATTAAGCTTCTTGGAGATGATAATTATAATGAAAACTAG 3090 0.3916 MKFLLLILRLYVASALSSDGSTLLSLSKHWTSVPPSINSSWKPSDSTPCSWLGVQCDHDSRVVSLDLTSSTIFGQLGSEIGSLNRLHTIVLSRNGFSGRIPPELGNCSLLESINFSSNSFSGQIPYSLKKLRNLRYLNFYSNQLTGGIPDFLFQIPHLQQVYLYDNSISGHIPSNIGNATELSKLYLSVNYLSGIIPSSIGEISFKFGKTLTILDVSQNNLTGSIGFLEGHDSLEEVNVSYNSFVGVVPQGALKYLHSSPTSFLGIPGLCVPCSTLFELSGTSTFYLKPCDNCKFKYESGKHIFNVVIRIVEVGSPMLVIIVAIFLVRFIRMRLSDQISMEDVIAYNEEEQELWPLRGEHNLENGVIDLKGEVMRATENLDDPYIIGRGGHGTIYKAQLDFGVFAVKKIVAKSKRKRLSMVREIKIIKKIRHQNVARFLGYWIGDDYGLIFLRYMENGSLHDILHENDAPHSLDWTVRYKIAVGVAKGLEYLHHGCDPPILHRDISPKNILLDSDMEPYITDFGISIALNQPSTMMQMRSTYHLGTRGFIAPEIASTIVSSSESDVYSYGVVLLELMTRKKVLDSLFEEKETTLVGWFKSVWRETREIEEIVDSNLSRELSDLKVVVQVIKVLLVALICTQTDPRKRLKMRDVIKIFEAPTVQGIHIQNDRTSFHLGSALSTALSSIFMQARTIVIKGLPKDIKWRELPNLLRWFPGYEVSQLSLVHEKPIAYALFNTAQQAVAAKDSLQDLVFDAETKSVLRSQIADKQYFVKRGAFDHGKGLCTAVDYPHIGYGSASPSSPNYLPSDVQGIFMASPSYHPYVSLHDVLHVRDPMLTLAWNVRYKIAVGIAHELAYLHHHCDPPILHHYINPKNIFLDFDMQPHICDFGVSRTWNQSSCAAGEPSTHACFPSTENGYMREEGVACDVYNYGVVLVELISGKKVLDLDPSLLKDTTLVEWVRCTWMETRDVDKIVDSRLAWELDNLNVEVVQVTEVISVALLCTDKDPHQRPTMKTVIKLLGDDNYNEN 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0058 1029 Gene3D - 689 775 IPR012677 -
Sto1g0058 1029 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 226 659 - -
Sto1g0058 1029 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 225 - -
Sto1g0058 1029 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 824 1026 - -
Sto1g0058 1029 SUPERFAMILY L domain-like 19 290 - -
Sto1g0058 1029 SUPERFAMILY RNA-binding domain, RBD 687 761 IPR035979 GO:0003676
Sto1g0058 1029 ProSitePatterns Protein kinases ATP-binding region signature. 386 412 IPR017441 GO:0005524
Sto1g0058 1029 Gene3D Ribonuclease Inhibitor 158 297 IPR032675 -
Sto1g0058 1029 ProSiteProfiles Protein kinase domain profile. 380 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0058 1029 Pfam Leucine rich repeat N-terminal domain 17 57 IPR013210 -
Sto1g0058 1029 ProSiteProfiles Protein kinase domain profile. 674 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0058 1029 Gene3D Phosphorylase Kinase; domain 1 364 452 - -
Sto1g0058 1029 PANTHER OS08G0446200 PROTEIN 4 225 - -
Sto1g0058 1029 PANTHER OS08G0446200 PROTEIN 824 1026 - -
Sto1g0058 1029 PANTHER OS08G0446200 PROTEIN 226 659 - -
Sto1g0058 1029 ProSitePatterns Tyrosine protein kinases specific active-site signature. 500 512 IPR008266 GO:0004672|GO:0006468
Sto1g0058 1029 Gene3D Ribonuclease Inhibitor 16 157 IPR032675 -
Sto1g0058 1029 SUPERFAMILY Protein kinase-like (PK-like) 819 1021 IPR011009 -
Sto1g0058 1029 SUPERFAMILY Protein kinase-like (PK-like) 371 656 IPR011009 -
Sto1g0058 1029 Pfam Protein kinase domain 385 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0058 1029 Pfam Protein kinase domain 839 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0058 1029 Gene3D Transferase(Phosphotransferase) domain 1 455 672 - -
Sto1g0058 1029 Gene3D Transferase(Phosphotransferase) domain 1 823 1028 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0058 Sto-Chr1 380474 385426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0058 64 658 Receptor kinase-like Gene Family AT1G73080 40.232 5.95e-117 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g0058 Pkinase 4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0058 - - tcc:18595189 467.618