Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0054 ATGAAACTCCTATTATTAATACTCTGTTTCTATGCTTCCTCTTATTGTGTTGCTTTTGCTTTGAGCTCCGATGGGTTGACTCTCTTGTCACTGTTAAAGCATTGGATTTCTGTGCCTCCTTCCATCAATTCAAGCTGGAAGGCCTCTGATTCTACTCCTTGCTCATGGCTAGGAGTACAATGTGACCATGACAGCCATGTGGTCTCCCTTAACCTCACTGTTTCCTCCATTTTTGGTCAACTTGGCTCagaaattggaaacttaaaTCGCTTGCACACCCTTGAGTTGTCCAAAAATGGTTTATCAGGAACAATACCCCTTGAGCTAGGCAATTGTAGTCTGCTTGAGCATATCAACCTTTCTAACAACTCCTTTAGTGGACACATTCCATACTCCTTGAAAAATTTGCAAAATTTGCAGTATTTGAGCTTTTATTCTAATCAGCTCACTGGTGGAATTCCTGAGTTTTTGTTTCAAATTCCTCATCTACAAGAGGTGTACCTGTATTACAACAACATTAGTGGTCCTATCCCCTCCAATATTGGAAACGCGACTGAATTGTCAAAGTTGTATCTTTCTGGTAATCAGTTGTCAGGGATCATCCCCTCTTCCATAGGTGAAATCCCTTCCCTATTTGGGCACTTGATGATGCTGCAAAGTCTGGATGTATCCCAGAACAATTTGACAGTACCAGAAAGTCTAATGAAATATCTGAGTTCTTCTCCGACATCATTCTTGGGAATTCCTGGTCTCTGTGTCTCTTGTCCAGATTTGCATTTGTCCAGGTTTCATACAAACTTGAAGCCATGTGACAATTGCAAATCTAAATATGAATCAACGAATCACAAATATGAATCAACGAATCACAAACGCATctctaaatttgtaattttgattGTTGAAGTTGGATCCCCAATGTTAGTTgctatttttcttataaaactgattcacaagtgTCTTTCTGATTCTGACCAAATATCAATGGAGGATGTCATTGGCTATAATGAAGAAGAGCAAGAGCTGTGGTCTTTAATGGAAGAACATAGTTTAGAAAATGGAATTATTGACCTAAGATGTAAGGGGGAAGTGATGAAGGCTACAGAGAATCTAGATGATCGATATATAATTGGCAGAGGAGGGCAGGGGACCATTTACAAAGCTGAACTGGATTTTGGAGTTTTTGCTGTAAAGAAGATTGTTGCAAAGagcaaaagaaaaagattaagCATGGCTAGAGAAATTAAAATCATTAAGAAGATTAGGCATCAAAATGTTGCAAGATTTCTAGGCTGCTGGATAGGAGATGATTACGGTCTAATCTTCCTCAGGTACATGGAAAATGGGAGCCTTCATGACATTTTGCATGAAAATGATCCACCACATTCCCTAGATTGTACTGTGAGCTATCAGATAGCTGTCGGAGTTGCAAAGGGACTGGAATATCTCCATCATGGATGTGATCCTCCCGTACTGCATCGAGACATCAGCCCAAAGAATATACTTCTTGATTCTGATATGGAGCCTTATATTACTGATTTTGGTATTTCCATTGCTTTGAATCAGCCCTCTACTATGCAGCGAATGCGGTCAACATATCATCTAGAGATTGCATCTACAATAGTATCGAGCAGTGAATCTGATGTATATAGTTATGGTGTAGTTTTGCTTGAGCTCATGACGGGAAAGAAAGTATTAGATTCTTCATTTGAAGAGAAGGAAACCACTTTAGTAGGGTGGTTTAAATCTGTATGGAGGGAAACCAGAGAAATTGAAGAGATTGTTGATTCAAACCTATCGAGGGAACTTTCAGATTTAAAAGTAGTGGTACAGGTTATCAAAGTGCTTTTGGTGGCCTTGATATGTACACAGACGGATCCTGGGAAGAGACTGAAAATGAGAGATGTTATCAAAATCTTTGAAGCACCCACAGTTCAAGGAATTCATATTCAAAATGACAGAACTTCATTTCATTTGGGGAGTGCTCTTTCTACTgctctctcttctatttttaTGCAGGCTCGAACCGTTGTTATAAAAGGCCTTCCCAAAGACATAAAACGGAGAGAACTGCCGAATCTACTGAGATGGTTTCCTGGATACGAAGTTTCTCAACTGAGTTTGGTACATGAAAAACCCATAGCTTATGCTCTCTTCAACACAGCACAACAAGCAGTTGCAGCCAAAGATAGTCTTCAGGACTTGGTCTTTGATGCAGAGACAAAGTCAGTGCTACGCTCACAGATTGCTGATAAACAATATTTTGTAAAAAGAGTAGTGATGCGTGAAAATGATGTGAGAAGCACGGATAAAGGGACCAATATGAGGAGGAAAATACAGCAGAATTTTAATAGTTCAGGTGCATATGATAATGTTCATGGCAAAGGATTATGCACTGCTGTGGATTACCCTCACATTGGTTATGGAAGTGCAAGTCCTTCTTCTCCTAATTATCTCCCATCCGATGTTCAGGGAATATTCATGGCTTCACCTTCATATCATCCATATGTAAGCCTTCATGATGTTTTGCATGTACGAGATCCGATGTTAACCTTGGTGTGGAATGTCCGCTATAAGATAGCTGTTGGAATTGCACATGAACTAGCATATCTCCATCACCACTGTCATCCTCCCATACTGCATCACTATATCAATCCAAAGAACATATTTCTTGATTTTGACATGGAACCTCACATATGTGATTTTGGTGTTTCCAGGACTTGGAATCAGTCCTCTTGTGCAGCAGGTGAGCCTTCTACACATGCTTGTTTTCCTTTTACAGAGAATGGATATATGAGAGAGGAGGGTGTTGCATGTGATGTATATAATTATGGGGTAGTTTTGGTTGAACTAATAAGTGGGAAGAAGGTATTAGATTTGGATCCCTCATTTCTAAAGGATACTAGTTTAGTGGAATGGGTTCGATGTACGTGGATGGAAACAAGAGATGTTGATAAAATTGTTGATTCGAGGCTTGCATGGGAGTTGGTTGATTTGAATGTGGAGGTACAAGTTACTGAAGTGATTTCTGTTGCTTTGTTATGTACTGACAAGGATCCACACCAGAGACCCACAATGAAGACTGTTATTAAGCTTCTTGGAGATGATAATTATAATGAAAACTAG 3123 0.3846 MKLLLLILCFYASSYCVAFALSSDGLTLLSLLKHWISVPPSINSSWKASDSTPCSWLGVQCDHDSHVVSLNLTVSSIFGQLGSEIGNLNRLHTLELSKNGLSGTIPLELGNCSLLEHINLSNNSFSGHIPYSLKNLQNLQYLSFYSNQLTGGIPEFLFQIPHLQEVYLYYNNISGPIPSNIGNATELSKLYLSGNQLSGIIPSSIGEIPSLFGHLMMLQSLDVSQNNLTVPESLMKYLSSSPTSFLGIPGLCVSCPDLHLSRFHTNLKPCDNCKSKYESTNHKYESTNHKRISKFVILIVEVGSPMLVAIFLIKLIHKCLSDSDQISMEDVIGYNEEEQELWSLMEEHSLENGIIDLRCKGEVMKATENLDDRYIIGRGGQGTIYKAELDFGVFAVKKIVAKSKRKRLSMAREIKIIKKIRHQNVARFLGCWIGDDYGLIFLRYMENGSLHDILHENDPPHSLDCTVSYQIAVGVAKGLEYLHHGCDPPVLHRDISPKNILLDSDMEPYITDFGISIALNQPSTMQRMRSTYHLEIASTIVSSSESDVYSYGVVLLELMTGKKVLDSSFEEKETTLVGWFKSVWRETREIEEIVDSNLSRELSDLKVVVQVIKVLLVALICTQTDPGKRLKMRDVIKIFEAPTVQGIHIQNDRTSFHLGSALSTALSSIFMQARTVVIKGLPKDIKRRELPNLLRWFPGYEVSQLSLVHEKPIAYALFNTAQQAVAAKDSLQDLVFDAETKSVLRSQIADKQYFVKRVVMRENDVRSTDKGTNMRRKIQQNFNSSGAYDNVHGKGLCTAVDYPHIGYGSASPSSPNYLPSDVQGIFMASPSYHPYVSLHDVLHVRDPMLTLVWNVRYKIAVGIAHELAYLHHHCHPPILHHYINPKNIFLDFDMEPHICDFGVSRTWNQSSCAAGEPSTHACFPFTENGYMREEGVACDVYNYGVVLVELISGKKVLDLDPSFLKDTSLVEWVRCTWMETRDVDKIVDSRLAWELVDLNVEVQVTEVISVALLCTDKDPHQRPTMKTVIKLLGDDNYNEN 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0054 1040 Gene3D Ribonuclease Inhibitor 179 241 IPR032675 -
Sto1g0054 1040 Gene3D Ribonuclease Inhibitor 23 178 IPR032675 -
Sto1g0054 1040 SUPERFAMILY Protein kinase-like (PK-like) 360 638 IPR011009 -
Sto1g0054 1040 SUPERFAMILY L domain-like 23 267 - -
Sto1g0054 1040 PANTHER OS08G0446200 PROTEIN 836 1037 - -
Sto1g0054 1040 PANTHER OS08G0446200 PROTEIN 212 641 - -
Sto1g0054 1040 PANTHER OS08G0446200 PROTEIN 4 229 - -
Sto1g0054 1040 SUPERFAMILY RNA-binding domain, RBD 660 737 IPR035979 GO:0003676
Sto1g0054 1040 Gene3D Transferase(Phosphotransferase) domain 1 835 1039 - -
Sto1g0054 1040 Gene3D Transferase(Phosphotransferase) domain 1 445 654 - -
Sto1g0054 1040 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Sto1g0054 1040 Gene3D Phosphorylase Kinase; domain 1 358 444 - -
Sto1g0054 1040 Pfam Protein kinase domain 857 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0054 1040 Pfam Protein kinase domain 375 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0054 1040 Gene3D - 671 757 IPR012677 -
Sto1g0054 1040 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515
Sto1g0054 1040 SUPERFAMILY Protein kinase-like (PK-like) 831 1032 IPR011009 -
Sto1g0054 1040 ProSiteProfiles Protein kinase domain profile. 707 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0054 1040 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 836 1037 - -
Sto1g0054 1040 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 229 - -
Sto1g0054 1040 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 212 641 - -
Sto1g0054 1040 ProSiteProfiles Protein kinase domain profile. 370 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0054 1040 ProSitePatterns Tyrosine protein kinases specific active-site signature. 490 502 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0054 Sto-Chr1 361175 366564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0054 66 640 Receptor kinase-like Gene Family AT1G73080 37.232 1.25e-97 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g0054 Pkinase 6.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0054 - - tcc:18595189 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0054 1 361175 366564 Sto1g0054 1 361175 366564 ECH