Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0053 ATGAAATTCTCATTCTTCATCCTATGCTTCTCTGCCCCTTTATATCTTGCTTCTGCTTTGAGCTCCGATGGTTTGACTCTCTTATCACTCCTAAAGCACTGGACTTTTCTGCCTCCTTCCATCAATTCAAGCTGGAAGGCTTCTGATTCTACCCCATGCCCATGGGTTGGAGTACAATGTGACCATAATAGCTTTGTGATCTCTCTTAACCTCACTGCTTCTGGGATTTCTGGTCAACTTGGACCAGAAATTGGGAACTTGAATCACTTGCAATCCATTGTGTTGTTTAGAAATGGTTTCTCAGGAACAATACCTCCAGAGTTAGGCAATTGTAGTCTGCTTGAGTATGTTGACCTTTCTGAAAACTCCCTTAGTGGACACATACCATATACCTTGAAAAATTTGCATAGTCTTAAGCATGTCCTTCTTCATGATAATAACCTTTCTGGGGAATTACCTTTAGAGCTTACAGAGCTCAAGAACCTTAAAAATATCTCATTATTTTACAATCATTTGTCTGGCATTATACCTCAAAGCTTGGGAATTAATAGCAGTTTAGTGAAGTTGGATTTGATGAATAATAACTTCACTGGTAGCATCCCTCCAAACCTTTGTTTTGGAAAGCAATTACGGGTATTGAACGTAGGTCTTAACCAACTTCATGGAGGTGAGGTTCCTTTAGAAATTGGGCAGCTGAAAAAGCTGCAATGTCTCGATGTATCCTTGAACAATTTGACAGGAGGCATAAATATCCTTAATGAACTTTCCTCATTAATTGATGTCAATATATCATACAATTCCTTTGTTGGTCCTGTACCGAAAAGGCTGATGCTGTTTCTGAATTCTTCTCCATCATCATTCTTTGGAAATCCTGGTTTATGTGTCCAATGTTTGCCTTCTAATGGCTTGAATTGCATTAAAACTACCTACTTGAAGTCCTGTGACTACGGCCACAAAGGCCTCCCTAGATATGTCATTTTGATTTTAGAGCTCGGATCTTCAATGCTTGTTTCTATTTTGCTGGTAAAACTAATTCACATGCATTTTTCTGGCCAAATATCTCAAGATGATGTCATTGACTATTATGAAGAGCAAAAACTGTGGTCTATAGACTCGGGAGACCATAGAATTATTGACCTAGTATTTAAGCGAGAGGTAATGAAGGCTACTGAGAATctaaatgatcaatatataattggtgaagGAGGGCATGGAGTTGTTTATAGAGCCGACCTTGATTGTTTTGGAGTTTTTGCTGTAAAGAAGATTGTAATTacaaggaacaaaaggagaagacTAAGCATGGTCAGAGAAATTGAACTAGTCAAGGATTTAAGGCATCAAAATGTGGCAAGATTCCTAGGCTCCTGGGTTGGAAAGACTTATGGTTTAATCTTCACTAGGTATGTGGAAAATGGAACCCTTCATGATATTTTACATGAAAATGATCCATTACCATACTTAGCGTGGAATATTCGCTATAAGATTGCTATTGGAATTGCAAAGGGGTTGGCATATCTCCATGATAACTGTGATCCTCCCATACTGCATCGAGACATCAAACCAAAGAATATACTCCTTGATTATGATATGAAGCCTTATATTACTGATTTTGGTATTTCCATTGCCTTGAATCAGTCATCTGCTATGATTCGTATGCGATCAACATATCATCTAGAGATAGCATATACAACGGTACTGAGTTGTAAGTCAGATATATATAGTTATGGAGTAGTTTTGCTAGAGCTAATAACCAGAAAGAAAGTATTAGATTCTTCATTTGAGGAGGAGCAAACCACTTTAGTAGAGTGGTTTAGATCTGCATGGACGGAAGcacaaaaaattgaaaagattaTTGATCCGAGCCTTGCAAGTGAACTTTCGGATTTAGACAAGGAAGAAGTTATAGATGTGCTTTGGGTGGCTTTTATATGTACTGAGAAGGATCCTGgaaagagaatggaaatgagagaTATTGTCAAATTCTTTGAAGCGCTTAAATATTCAGGAGATTCAGTTCAATATGACCATAAATCAATTTATTTGGGAAATTCCCTTGACTTGTCTGCCACCTCTCTATCTTTCCAGGTGCATATGATCGAGGAAAACGATTATGTGATGCTGAAGATTACCCTCCTAGAACATATAGGCAaATCACTTCCAACTCCACATTATAAATCTGTAAGCCTTCATTACGTTTTGCATGAAAGGCATCCACCACAAACCTTGAAGTGGAATGTTCGCTATAAAATAGCTGTCGAAATCGCACACGAATTGGCACATTTTCATCACGAATGTGATCCTCCCGTAGTGCATCAAGATATCAATTCGAGGAATATACTTCTTGATTCTGAAATGAAACCTCACATATCTGAGCCATCCACTTCTTCTGCAAGAGAAGCATCTACAATGGAGGAAAGTGTCAAGTTTGATGTATATAATTATGGGGTAGTTTTGCTTGAACTAATAACCATGAAGAAAGTATTAAATTCATCATTGGAGAAGAAAGCTGCATTGGTAGAATGGGCTGGATCAGTGTGGAGGAGAACAGGAGAcactaaaaaaattgttgattcaGGCCTTGGAAAAGAGTTATGTGATTCAAGTGTAGCAGAACAAGTTTTCAAAGTGCTTTGGGTAGCTTTGTTATGTTCTTGGAAGGAACCAAGTAAGAGACCCACAATGAGAACTGTTGTTAAGCTTCTTTGA 2709 0.3677 MKFSFFILCFSAPLYLASALSSDGLTLLSLLKHWTFLPPSINSSWKASDSTPCPWVGVQCDHNSFVISLNLTASGISGQLGPEIGNLNHLQSIVLFRNGFSGTIPPELGNCSLLEYVDLSENSLSGHIPYTLKNLHSLKHVLLHDNNLSGELPLELTELKNLKNISLFYNHLSGIIPQSLGINSSLVKLDLMNNNFTGSIPPNLCFGKQLRVLNVGLNQLHGGEVPLEIGQLKKLQCLDVSLNNLTGGINILNELSSLIDVNISYNSFVGPVPKRLMLFLNSSPSSFFGNPGLCVQCLPSNGLNCIKTTYLKSCDYGHKGLPRYVILILELGSSMLVSILLVKLIHMHFSGQISQDDVIDYYEEQKLWSIDSGDHRIIDLVFKREVMKATENLNDQYIIGEGGHGVVYRADLDCFGVFAVKKIVITRNKRRRLSMVREIELVKDLRHQNVARFLGSWVGKTYGLIFTRYVENGTLHDILHENDPLPYLAWNIRYKIAIGIAKGLAYLHDNCDPPILHRDIKPKNILLDYDMKPYITDFGISIALNQSSAMIRMRSTYHLEIAYTTVLSCKSDIYSYGVVLLELITRKKVLDSSFEEEQTTLVEWFRSAWTEAQKIEKIIDPSLASELSDLDKEEVIDVLWVAFICTEKDPGKRMEMRDIVKFFEALKYSGDSVQYDHKSIYLGNSLDLSATSLSFQVHMIEENDYVMLKITLLEHIGKSLPTPHYKSVSLHYVLHERHPPQTLKWNVRYKIAVEIAHELAHFHHECDPPVVHQDINSRNILLDSEMKPHISEPSTSSAREASTMEESVKFDVYNYGVVLLELITMKKVLNSSLEKKAALVEWAGSVWRRTGDTKKIVDSGLGKELCDSSVAEQVFKVLWVALLCSWKEPSKRPTMRTVVKLL 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0053 902 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Sto1g0053 902 Gene3D Ribonuclease Inhibitor 23 179 IPR032675 -
Sto1g0053 902 Gene3D Phosphorylase Kinase; domain 1 373 467 - -
Sto1g0053 902 Gene3D Transferase(Phosphotransferase) domain 1 470 681 - -
Sto1g0053 902 ProSiteProfiles Protein kinase domain profile. 393 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0053 902 SUPERFAMILY L domain-like 22 295 - -
Sto1g0053 902 ProSitePatterns Protein kinases ATP-binding region signature. 399 422 IPR017441 GO:0005524
Sto1g0053 902 PANTHER OS08G0446200 PROTEIN 7 139 - -
Sto1g0053 902 PANTHER OS08G0446200 PROTEIN 252 666 - -
Sto1g0053 902 PANTHER OS08G0446200 PROTEIN 135 249 - -
Sto1g0053 902 PANTHER OS08G0446200 PROTEIN 726 902 - -
Sto1g0053 902 Gene3D Transferase(Phosphotransferase) domain 1 802 902 - -
Sto1g0053 902 SUPERFAMILY Protein kinase-like (PK-like) 723 902 IPR011009 -
Sto1g0053 902 SUPERFAMILY Protein kinase-like (PK-like) 380 663 IPR011009 -
Sto1g0053 902 Pfam Protein kinase domain 397 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0053 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Sto1g0053 902 SMART serkin_6 393 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0053 902 Gene3D Transferase(Phosphotransferase) domain 1 726 801 - -
Sto1g0053 902 Gene3D Ribonuclease Inhibitor 180 302 IPR032675 -
Sto1g0053 902 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 726 902 - -
Sto1g0053 902 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 135 249 - -
Sto1g0053 902 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 252 666 - -
Sto1g0053 902 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0053 Sto-Chr1 349642 354466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0053 729 902 Receptor kinase-like Gene Family AT1G73080 38.000 8.74e-34 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g0053 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0053 - - qsu:112010432 474.937