Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0052 atgaaattcctattcttcATCCTATGCTTCTCTACCCCTTTATGTGTTTCTTCTGCTTTGAGCTCCCATGGATTGACTCTATTATCACTCTTAAAGCACTGGACTTTTGTGCCTCCTTCCATCAATTCAAGCTGGAAGGCCTCTGATTCTTCCCCTTGCTCATGGGTAGGAATACAATGTGACCATCACAGTAATGTGGTCTCTCTTAATCTCACTGCTTCTGGGATTAATGGTACACTAGGAccagaaattggaaacttgaattactTGCATACCCTTGTGTTGTTGTCAAATGATTTCTCAGGAATAATACCTCTAGAGTTAGGTAATTGTAGTATGCTTGAGTATATTGATCTTTCGGATAACTATTTTAGTGGACAAATACCGTATACCTTGAAGAACTTACTGAGgcttaagcatatatatatgtttgacaaCAATTTATCTGGAGTAATACCTCAAAGCTTGGGGATTAATAGCAGTTTAGAGAGATTGGATTTGATGAATAATAAGTTCACTGGTAACATCCCACCTAATCTGTGTTTTGGAAAGCAATTACGTGTACTGAATTTAGGTGAGATTCCTTTAGAAATTGGGAAGATGAAAAAGCTGCTAAGTTTGGATGTGTCTCTGAACAATCTGACAGGAAGTGTGTATGTTCTTAATGAACTTTCTTCTTTGATTGAAGTCAATATTTCGTACAACTCATTCGCTGGTCCCGTACCAGCAAGGCTAATGCAATATCTCAATTCTTCTATGTCATCATTTTTGGGAAATCCTGGCCTTTGTATTGATTGTTCACTGTCAAAAGGTCTGAGTTGTGCTGAAATTGAAACTTTGAAGCTATGTGGTCACCACAAATCAACCAATAAGAATGGCTTAAGCATAGTTAAAATTGTGATGATTGAACTTGGATGCTCAATCTTCCTGTATTTCATACTACCAGGACTAGTTTACAAGTACGTGAAATACAGATCAAAGCAGAGagaaatggaagaagaagccGAATTGTCTACAGCTATTGACAGAATGGTCCATGGAATAGTTGGAGATGAGCCATCATCTTCCCTAGTCAAGGAAGTGATGAAGGCTACAGGGAACCTAAATGACAAGCATATCATTGGAAGAGGAGCCCATGGAGTTGTTTATAAAGCCTCAATCGATCCGCGATCGGGTCACGTTGTTGCTGTGAAGAAGGTTGTTTTTAGAAGGAACAAGAAGAGGAGTTTAAGCATGCTGAGAGAAATTGAAACGGTCAGGAAGATCAAGCATCGAAATCTGGTCAGGTTTGAAGGCTTCTGGATGGGGAAAGACTATGGTCTAATCTTCTATCCTTACATGGTAAATGGAAGCCTTCATGATGTTCTTCATGAAAGGAATCAACTACCAACCTTGGGGTGGAATATCCGGTATAAGATAGCCGTTGGAATTGCGAATGGACTTGCATATCTCCATCATGATTGTGATCCTCCCATTGTTCATCAAGATATCAAACCCAAAAACATCCTTCTTGATTCTGAAATGGAAGCTCACATATCtgattttggtgtagccatgctTTTGAATCCGTCCTCGTCTTCTCCAACACAAAAGAGATCTACATATATTGCATTAGGTACAGTTGGGTATATTGCACCAGTTCAGAGTGGTGTTTCTGATGTGTATAGTTATGGGGTAGTTTTGCTTGAGCTGATAACTGGGAAAAAAGTATTAGATCCATCATTTATGGAGAAAATGACTTTAGTAGGATGGGTTAGATCCATGTGGATGCATACAAGAAGTATTGAAAACATTGTTGATTCAAGACTTGCAAGAGAGTTATCAGATGGTAATGTAGTGGAACAAGTTACTAGAGTTCTTCGTATAGCACTTCAATGTTCTGAGAAGGATCCACGCAAGAGACCCACAATGAGAAGAGTTATTAAGCTTCTTTGA 1935 0.3695 MKFLFFILCFSTPLCVSSALSSHGLTLLSLLKHWTFVPPSINSSWKASDSSPCSWVGIQCDHHSNVVSLNLTASGINGTLGPEIGNLNYLHTLVLLSNDFSGIIPLELGNCSMLEYIDLSDNYFSGQIPYTLKNLLRLKHIYMFDNNLSGVIPQSLGINSSLERLDLMNNKFTGNIPPNLCFGKQLRVLNLGEIPLEIGKMKKLLSLDVSLNNLTGSVYVLNELSSLIEVNISYNSFAGPVPARLMQYLNSSMSSFLGNPGLCIDCSLSKGLSCAEIETLKLCGHHKSTNKNGLSIVKIVMIELGCSIFLYFILPGLVYKYVKYRSKQREMEEEAELSTAIDRMVHGIVGDEPSSSLVKEVMKATGNLNDKHIIGRGAHGVVYKASIDPRSGHVVAVKKVVFRRNKKRSLSMLREIETVRKIKHRNLVRFEGFWMGKDYGLIFYPYMVNGSLHDVLHERNQLPTLGWNIRYKIAVGIANGLAYLHHDCDPPIVHQDIKPKNILLDSEMEAHISDFGVAMLLNPSSSSPTQKRSTYIALGTVGYIAPVQSGVSDVYSYGVVLLELITGKKVLDPSFMEKMTLVGWVRSMWMHTRSIENIVDSRLARELSDGNVVEQVTRVLRIALQCSEKDPRKRPTMRRVIKLL 644
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0052 644 Pfam Protein kinase domain 370 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0052 644 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 134 218 - -
Sto1g0052 644 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 139 - -
Sto1g0052 644 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 221 644 - -
Sto1g0052 644 ProSitePatterns Protein kinases ATP-binding region signature. 374 399 IPR017441 GO:0005524
Sto1g0052 644 SMART serkin_6 368 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0052 644 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Sto1g0052 644 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Sto1g0052 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Sto1g0052 644 PANTHER OS08G0446200 PROTEIN 221 644 - -
Sto1g0052 644 PANTHER OS08G0446200 PROTEIN 134 218 - -
Sto1g0052 644 PANTHER OS08G0446200 PROTEIN 4 139 - -
Sto1g0052 644 ProSiteProfiles Protein kinase domain profile. 368 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0052 644 Gene3D Phosphorylase Kinase; domain 1 347 446 - -
Sto1g0052 644 SUPERFAMILY Protein kinase-like (PK-like) 352 644 IPR011009 -
Sto1g0052 644 SUPERFAMILY L domain-like 23 263 - -
Sto1g0052 644 Gene3D Ribonuclease Inhibitor 184 270 IPR032675 -
Sto1g0052 644 Gene3D Transferase(Phosphotransferase) domain 1 447 644 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto1g0052 Sto-Chr1 345487 348140 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0052 65 642 Receptor kinase-like Gene Family AT1G17750 43.384 4.87e-136 423
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g0052 Pkinase 2.1e-41 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0052 - - qsu:112010432 532.332