Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0050 ATGAGGCAACTCTTGGTGCTTCTTCTTCTAtccttttcttgtttcttaTATTCTGCTTCTGCTTTGAGCTCTGATGGGGAGACTCTATTGTCACTCCGGAGGCGTTGGACTTCTGTGCCTCCTTCCATTAACTCCACCTGGAATGCCTCTCATTCTACTCCTTGTTCTTGGGCTGGAATCCGGTGCGATCATGCCCACAATGTGATCTCCCTTAACCTTAATGATTATGGGATTattggtcaattaggacctgagATTGGacatttgactcacttgcagaATTTAGTGTTGTTCAATAATGGCTTCTCTGGAAAAATTCCTCCTGAAATAGGAAATTGTAGTCTCTTACAGTACTTGGACCTTAAAAACAATTCCTTTAGTGGACAAATACCTGATAGCTTCAAAAACTTGCTTAATTTGGAGTATATCAGTCTTTCTACTAATCAACTCACTGGTCAATTTCCTGAATCCTTGACTCAAATTCCTCAACTTCAACTTGTTGAACTGTCTTATAACAATCTTACTGGTCCCATCCCTTCAAGTATAGGAAACATGAGTGAGCTTTTGATGCTGTATTTACAATTTAATCACTTGTCCAGGCAAATTCCTTCGTCAATCGGGAATTGCAGTAAATTACAAGAACTGTTTCTGAATCAGAATCAGTTTGAGGGAGTCTTGCCTCACACTCTTAACAAACTCCATAATATTGTTTATTTAGACTTTGCTGATAATGCTCTTAGGGGTACTGTTCCATTAGGTTCAGGAAGTTGTGAcaatttacttttcttggatCTATCAAATAATGTATTTAGTGGAGGCATTCCTTCAGGCTTGGGGAATTGCAGTGGTTTAACAAAGTTTATTGCTCTTAATAGTAGCTTCTCTGGCAGTATCCCATCCTCCATTGGTCTACTTCGAAATCTTTCGCTTCTACACCTTTATCAGAACCATTTGTCTGGAAAAATACCTCCTGAAATTGGTAATTGCAAGTCTTTGACAGAGTTAAATTTGTATTCCAATCAACTAGAGGGAGAGATTCCCAGTGAGCTAGGAAAGTTGAGTAAATTAAAAGATCTTAGATTGTATTTGAACCACTTGACGGGTGAAATTCCTCTGAGTGTCTGGAAGATTCCTAAACTTGAGTATATCCATTTGTACAATAATAGCCTTTCTGGAGAACTACCTTTGGAGATGACAGGGCTTAAGCATTTGAAGAATATCACACTGCATAACAACCACTTCTCTGGAGTCATACCTCAAACTTTAGGAATTAATAGCAGCTTAGTAGAGTTAGACTTTACAAATAATAACTTCTCTGGTAGCATCCCTCCAAATCTTTGTTAtggaaagaaattaagaaaactGAATTTGGGCCGCAATCGACTTCAAGGTGGCATACCTTCTGATGTAGGAAGGTGTACAACTCTTAGAAGTGCTAATGGTCTGATTGGCGAAATTCCTTCTGAGATTAGAGATTTACAGAATCTTGAGAGATTGGATCTGTCCCGAAACAATTTGACTGGAAGCATACAAGTTCTTGCTCAGATTCCCTTTTTTCTTGAAATCAATGTTTCTTACAATTCCTTTCAAGGTCCTATTCCAAAGAAGCTGTTTGAGTCACCTTattattcttcatcatcatttctTGGCAATCCTGGCCTATGTGTCAGTTGTTCATCATCAAACGGCTCGATTTGTACTGCAAGCAGTTATGTAAAGCCATGTGATCAAAAATCAACTCACCAAAAAGGTCTCAGCAAAGTTGAAATTGCAATGATAGCACTTGgatcctcaatattttttgtttttgttcttcTAGGACTGGTGTACATGTTTGTTGTCTGTGGTGGAAAATCTGAGGAAGAAATCCCCATTTCCGTGGAAGATGGCACAATCTCACTTCTTAATGAAGTGATGGAAGCTACTGAAAACTTAAGCGATCAGCATATTATTGGCAGAGGAGCTCATGGAATTGTTTATAAAGCTGCAATAGATTCGACTCGAGTTTTTGCTGTGAAGAAGATTGCATTTCTTGGGAACAAAGGCAAGAGCTTAAGCATGATTAGAGAAATTCAAACCCTTGGAAGGATTAGGCATCGAAATCTTGTGAAATTAGAAGACTTTTGGTGGAGAAAGGACTTTGGTCTAATCTTGTACCCTTACATGCCAAATGGAAGCCTTCATGATATCTTGCATGAAAAGAATCCACCACCATCCTTAGAGTGGAATGTTCTGTATAAGATAGCGATTGGAATTGCTCATGGATTGGCTTACCTCCATTATGACTGTGATCCTCCCATAGTGCACCGCGACATCAAACCGAAAAATATCCTTCTAGATGCTGATATGGAGCCTCATATTTCTGATTTTGGTATTGCCAAGCTTCTGGATCAAAGTTCTGCTTCAGCACCATCTATATCTGTTCCTGGCACAATAGGGTATATTGCACCAGAGAATGCATATACAACAGCAAGTAGTAGAGAATCTGATGTATACAGTTATGGGGTAGTTTTGCTTGAGTTGATAACTAGGAAGAAGGCAGTGGATCCATCATTTATGGAGGAAATTGATATAGTGGGTTGGGTCAGAACAGTGTGGGGAGAAACAGGAgatattgaagaaattgttgATTCAAGCCTTGCAAATGAGTTAATGAATTCAAAAGTACTTGAACAAGTTAGCAAGGTGCTTTTGGTGGCTTTTAGATGCACTGAGAAGGATCCCCACATGAGACCCACAATGAGACATGTTGTTAAGCAATTAGAAGTTACTAATCTCCAggcaagaagaagataa 2796 0.3687 MRQLLVLLLLSFSCFLYSASALSSDGETLLSLRRRWTSVPPSINSTWNASHSTPCSWAGIRCDHAHNVISLNLNDYGIIGQLGPEIGHLTHLQNLVLFNNGFSGKIPPEIGNCSLLQYLDLKNNSFSGQIPDSFKNLLNLEYISLSTNQLTGQFPESLTQIPQLQLVELSYNNLTGPIPSSIGNMSELLMLYLQFNHLSRQIPSSIGNCSKLQELFLNQNQFEGVLPHTLNKLHNIVYLDFADNALRGTVPLGSGSCDNLLFLDLSNNVFSGGIPSGLGNCSGLTKFIALNSSFSGSIPSSIGLLRNLSLLHLYQNHLSGKIPPEIGNCKSLTELNLYSNQLEGEIPSELGKLSKLKDLRLYLNHLTGEIPLSVWKIPKLEYIHLYNNSLSGELPLEMTGLKHLKNITLHNNHFSGVIPQTLGINSSLVELDFTNNNFSGSIPPNLCYGKKLRKLNLGRNRLQGGIPSDVGRCTTLRSANGLIGEIPSEIRDLQNLERLDLSRNNLTGSIQVLAQIPFFLEINVSYNSFQGPIPKKLFESPYYSSSSFLGNPGLCVSCSSSNGSICTASSYVKPCDQKSTHQKGLSKVEIAMIALGSSIFFVFVLLGLVYMFVVCGGKSEEEIPISVEDGTISLLNEVMEATENLSDQHIIGRGAHGIVYKAAIDSTRVFAVKKIAFLGNKGKSLSMIREIQTLGRIRHRNLVKLEDFWWRKDFGLILYPYMPNGSLHDILHEKNPPPSLEWNVLYKIAIGIAHGLAYLHYDCDPPIVHRDIKPKNILLDADMEPHISDFGIAKLLDQSSASAPSISVPGTIGYIAPENAYTTASSRESDVYSYGVVLLELITRKKAVDPSFMEEIDIVGWVRTVWGETGDIEEIVDSSLANELMNSKVLEQVSKVLLVAFRCTEKDPHMRPTMRHVVKQLEVTNLQARRR 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0050 931 PANTHER OS08G0446200 PROTEIN 8 252 - -
Sto1g0050 931 PANTHER OS08G0446200 PROTEIN 163 298 - -
Sto1g0050 931 PANTHER OS08G0446200 PROTEIN 517 929 - -
Sto1g0050 931 PANTHER OS08G0446200 PROTEIN 283 511 - -
Sto1g0050 931 SMART serkin_6 645 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0050 931 SUPERFAMILY L domain-like 26 303 - -
Sto1g0050 931 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Sto1g0050 931 Gene3D Ribonuclease Inhibitor 180 281 IPR032675 -
Sto1g0050 931 Gene3D Transferase(Phosphotransferase) domain 1 722 930 - -
Sto1g0050 931 Gene3D Phosphorylase Kinase; domain 1 618 721 - -
Sto1g0050 931 SUPERFAMILY Protein kinase-like (PK-like) 629 925 IPR011009 -
Sto1g0050 931 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 517 929 - -
Sto1g0050 931 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 163 298 - -
Sto1g0050 931 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 283 511 - -
Sto1g0050 931 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 252 - -
Sto1g0050 931 SUPERFAMILY RNI-like 226 540 - -
Sto1g0050 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 767 779 IPR008271 GO:0004672|GO:0006468
Sto1g0050 931 Gene3D Ribonuclease Inhibitor 286 563 IPR032675 -
Sto1g0050 931 Pfam Protein kinase domain 647 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0050 931 ProSiteProfiles Protein kinase domain profile. 645 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0050 931 ProSitePatterns Protein kinases ATP-binding region signature. 651 674 IPR017441 GO:0005524
Sto1g0050 931 SMART LRR_typ_2 210 232 IPR003591 -
Sto1g0050 931 SMART LRR_typ_2 401 424 IPR003591 -
Sto1g0050 931 SMART LRR_typ_2 89 113 IPR003591 -
Sto1g0050 931 SMART LRR_typ_2 493 515 IPR003591 -
Sto1g0050 931 SMART LRR_typ_2 305 329 IPR003591 -
Sto1g0050 931 SMART LRR_typ_2 185 209 IPR003591 -
Sto1g0050 931 SMART LRR_typ_2 450 473 IPR003591 -
Sto1g0050 931 SMART LRR_typ_2 330 353 IPR003591 -
Sto1g0050 931 ProSiteProfiles Leucine-rich repeat profile. 495 517 IPR001611 GO:0005515
Sto1g0050 931 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Sto1g0050 931 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0050 Sto-Chr1 334110 337526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0050 1 931 Receptor kinase-like Gene Family AT1G17750 39.452 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g0050 Pkinase 9.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0050 - - gmx:100778035 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0050 1 334110 337526 Sto1g0050 1 334110 337526 ECH