LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto1g0049	ATGAGGCATCTCTCGGTGCTTCTTCTTCTACtatccttttcttctttcttctattCTGCTTCTGCTTTGAGCTCTGATGGGGTGGCTCTATTGTCACTCCGGAGGCGTTGGACTTCAGTGCCTCCTCCCATTAACTCCACCTGGAATGCCTCTCATTCTACTCCTTGCTCATGGGGTGGAATCCAGTGTGACCATGCCCATAATGTGATCTCTCTTAACCTTTCTGATTATGGGATTgttggtcaattaggacctgagATTGGacatttgactcacttgcagaAACTTGCCTTGTTGAATAATGGCTTCTCTGGAAAAATTCCTCCTCAGTTAGGAAACTGTACCCACTTAGAGCACTTAGACCTTTCTAGCAACTACTTTAGTGGACAAATACCTGAttgcttcaaaaacttgcttAATTTGGAGTATCTCAGTCTTTCTATTAATGAACTCACTGGTCAAATTCCTGAATCCTTGACTCAAATTCCTCAACTTCAACTTGTTGAATTGTCTTATAACAGTCTTAGTGGTCCCATCCCTTCAAGTATAGGAAACATGAGTGAGCTTTCGCTGCTGTATTTACAAGGTAATCACTTATTGTCTGGGGAAATTCCTTCATCAATTGGGAATTGCAGTAAATTGAAGGAACTGTTTCTGAATCAGAATCAGTTTGAGGGAGTCTTGCCTCACACTCTTAACAACCTCCATGATATTGTTTATTTAGACTTTGCCGATAATGCTCTTAGGGGTACTGTTCCATTGGGTTCAGGAAGttgtgaaaatttatttatgttGGATCTGTCAAATAATGTATTCAGTGGAGGCATTCCTTCAGGTTTGGGGAATTGTAGTGGTTTAACAGAGTTTGCTGCTGTAAACAGTGGCTTTTCTGGCAGTATCCCATCCTCCATTGGTCTACTTCGAAGTCTTTCGATTCTACGCCTTCCTGAGAACCATTTGTCTGGAAAAATACCTCCAGAAATCGGCAACTGTAAGTCTTTgactgagttaactttgtattCCAATCAACTAGAGGGAGAAATTCCCAGTGAACTGGGAAAGTTGAGTGAATTGCAAGATCTTGAATTGTATTCGAACCATTTGACTGGTGAAATCCCTCTTAGTGTCTGGAAGATTCAAAGTCTTGAGTATATCCTTGTGTACAATAATAGCCTTTCTGGAGAACTACCTTTGGAGATGACAGAGCTCAAGTATTTGAAGAATATCACTTTGTTTAACAACCACTTTTCTGGAGTCATACCTCAAACTTTAGGAATTAATAGCAGCTTAGTAGTGTTAGACTTCACAAACAATAAGTTCACTGGCATAATCCCTCCAAATCTTTGTCACGGAAAGCAATTGAGAATACTGAATTTGGGCCTCAATCAACTTCGAGGTAGCATACCTTCTAATGTAGGAAGGTGTACCACTCTTACAAGTGCTAATGGGCTGATTGGCGAAATTCCTTCTGGGATTGGAACTTTGATGAATCTTCTCAGTCTGGATCTATCTCGAAACAACTTGAATGGAAGCATACAAGTTCTTTCCCAGATTCCTTTCTTACTTGAAATCAATGTTTCATACAATTCCTTTCAAGGTCCTATTCCAAAGAAGCTGATAGAGTCACCTTATTATTCTTCAACAGCATTTCTTGGCAATCCTGGCCTATGTATCAGTTGTTCATCATCAAACGGCTCAATTTGTAAAGCAAGCAGCTATGTAAAGCCATGTGATGAAAAATCAACTCACCAGAAAGGTCTAAGTAAAGTTAAAATTGCAATGATAGCACTTGGATCCTCCATATTTGTTGTCTTTTTGCTGTTGGGACTAGTGTATATGTTTGTCAGTGGTGGAAAATCTAAGCAGGAAGTGGAGATCTCTGCAAAAGAAGGTACTACCTCACTTCTTAACAAAGTGATGGAAGCTACTGCAAACCTAAGCGATCGATTTATTATTGGTAGAGGCGCACATGGAGTTGTTTATAAAGCTCCAGTTGATCCTGCTCAAGTTTTTGCTGTGAAGAAACTTGCATTTGCTGGGAACAAAGGCAAGAACCTAAGCATGGTTAGAGAAATTCAAACCCTTGGAAAGATTAGGCACCGAAATCTTGTCAAATTGGAAGACTTTTGGTTGAGGAAGGACTTTGGTCTAATCTTGTACACATACATGCCAAATGGAAGCCTTCATGATGTCTTGCATGAAAAGAATCCACCACCATCCTTAGAGTGGAATGTTCGGTATAACATAGCGATTGGAATTGCTCATGGATTGGCTTATCTCCATTTTGACTGTGATCCTCCCATTGTGCATCGCGACATTAAACCGAAAAATATACTTCTAGATGCTGACATGGAGCCTCATATTGCTGATTTTGGTATTGCCAAGCTTCTGGATCAAAGTTCTGCTTCAGCACCATCTATATCTGTTCCTGGCACAATAGGGTATATTGCACCAgAGAATGCATATACAACAGCAAATAATAGAGAATCTGATGTATACAGTTACGGGGTGGTTTTGCTCGAGTTGATAAGCAGAAAAAAGGTAGTAGATCCAACATTTATGGAGGGAATGGATATAGTGAGTTGGGTCAGAACCATGTGGGGACAAACAGAAGATATTGGTAAAATTGTTGATTCAAGTCTTGCCAATGAATTATTGGATTCAACTGTACTTGAACAAGTTAACAAGGTGCTTCAGGTGGCTTTGAGAAGTACCGAGAAGGATCCCCACAAGAGACCCACAATGAGACAGGTCATCAGGCAATTAGAAGATGCTAATCCCAGGACAAGAAGTAGAAAGAgctag	2805	0.3865	MRHLSVLLLLLSFSSFFYSASALSSDGVALLSLRRRWTSVPPPINSTWNASHSTPCSWGGIQCDHAHNVISLNLSDYGIVGQLGPEIGHLTHLQKLALLNNGFSGKIPPQLGNCTHLEHLDLSSNYFSGQIPDCFKNLLNLEYLSLSINELTGQIPESLTQIPQLQLVELSYNSLSGPIPSSIGNMSELSLLYLQGNHLLSGEIPSSIGNCSKLKELFLNQNQFEGVLPHTLNNLHDIVYLDFADNALRGTVPLGSGSCENLFMLDLSNNVFSGGIPSGLGNCSGLTEFAAVNSGFSGSIPSSIGLLRSLSILRLPENHLSGKIPPEIGNCKSLTELTLYSNQLEGEIPSELGKLSELQDLELYSNHLTGEIPLSVWKIQSLEYILVYNNSLSGELPLEMTELKYLKNITLFNNHFSGVIPQTLGINSSLVVLDFTNNKFTGIIPPNLCHGKQLRILNLGLNQLRGSIPSNVGRCTTLTSANGLIGEIPSGIGTLMNLLSLDLSRNNLNGSIQVLSQIPFLLEINVSYNSFQGPIPKKLIESPYYSSTAFLGNPGLCISCSSSNGSICKASSYVKPCDEKSTHQKGLSKVKIAMIALGSSIFVVFLLLGLVYMFVSGGKSKQEVEISAKEGTTSLLNKVMEATANLSDRFIIGRGAHGVVYKAPVDPAQVFAVKKLAFAGNKGKNLSMVREIQTLGKIRHRNLVKLEDFWLRKDFGLILYTYMPNGSLHDVLHEKNPPPSLEWNVRYNIAIGIAHGLAYLHFDCDPPIVHRDIKPKNILLDADMEPHIADFGIAKLLDQSSASAPSISVPGTIGYIAPENAYTTANNRESDVYSYGVVLLELISRKKVVDPTFMEGMDIVSWVRTMWGQTEDIGKIVDSSLANELLDSTVLEQVNKVLQVALRSTEKDPHKRPTMRQVIRQLEDANPRTRSRKS	934

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto1g0049	934	PANTHER	RECEPTOR KINASE-LIKE PROTEIN XA21	6	479	-	-
	Sto1g0049	934	PANTHER	RECEPTOR KINASE-LIKE PROTEIN XA21	520	921	-	-
	Sto1g0049	934	Pfam	Protein kinase domain	651	920	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto1g0049	934	Pfam	Leucine rich repeat	116	175	IPR001611	GO:0005515
	Sto1g0049	934	SUPERFAMILY	L domain-like	25	320	-	-
	Sto1g0049	934	Pfam	Leucine rich repeat N-terminal domain	24	64	IPR013210	-
	Sto1g0049	934	ProSitePatterns	Protein kinases ATP-binding region signature.	652	675	IPR017441	GO:0005524
	Sto1g0049	934	Gene3D	Ribonuclease Inhibitor	286	565	IPR032675	-
	Sto1g0049	934	SUPERFAMILY	Protein kinase-like (PK-like)	633	922	IPR011009	-
	Sto1g0049	934	ProSiteProfiles	Protein kinase domain profile.	646	929	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto1g0049	934	Gene3D	Ribonuclease Inhibitor	179	281	IPR032675	-
	Sto1g0049	934	PANTHER	LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN	6	479	-	-
	Sto1g0049	934	PANTHER	LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN	520	921	-	-
	Sto1g0049	934	SUPERFAMILY	RNI-like	227	540	-	-
	Sto1g0049	934	SMART	serkin_6	646	929	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto1g0049	934	Gene3D	Phosphorylase Kinase; domain 1	617	722	-	-
	Sto1g0049	934	Gene3D	Transferase(Phosphotransferase) domain 1	723	934	-	-
	Sto1g0049	934	Gene3D	Ribonuclease Inhibitor	23	178	IPR032675	-
	Sto1g0049	934	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	768	780	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto1g0049	Sto-Chr1	326851	330276	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto1g0049	1	931	Receptor kinase-like Gene Family	AT1G17750	39.909	0.0	677

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Sto1g0049		Pkinase	1.4e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto1g0049	-		-	csat:104778761	818.535