Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0014 ATGGGCGCGCACGCCGCTTTGCCTGTGCGCGTTCCTGCAGCATTATTCTTCCTTATTTTGTTCTCATCCCTCCTACCCATCTCCTTTTGTGGTTTATCCGATGATGCCAACGCCCTCTTGAAGTTTAAGCATGCTCTCCAAATCGGAGACTCCGATCCTCTCAGCAGTTGGGAACCCCATATCAATAATAAGCCCCCCTGCTTCGGTGACGCTGCCAATTGGGTCGGCATCTTCTGCTTCAACAACACTGTCTGGGGCTTCCGCCTCGAGAACATGGGTCTTCAGGGCAACATTGATATTCCCTCTCTTGCTTCCATGCCCCACCTTCGCTCCATTAGCTTCATGAACAATTCCTTCTCCGGTCCCTTTCCCAATTTCAATCTCCTCAGGAACTTGAAATCCCTCTACCTTTCCTTCAACCATTTCTCTGGACCCCTCCCCGATGACGCTTTCAAGTCCATGAATATGTTGAAGAAGGTTTATCTCTCCGATAATGAGTTCACCGGTCACATCCCCTCCTCCCTTGCCTCCTTGCCTAACCTCTTGATCCTCAGGCTTGACGCCAACAAGTTTTATGGCTCAATCCCTGATTTCCGAAGTCCCTCCTTGAAGAAGGTCAACTTCTCCAATAATGATTTTGAGGGTCCTATCCCCACCAATCTTACCACCTTCAACACCTCTTCCTTTGAAGGCAACAAACGCCTTTGTGGTGCGCCTTTGCCTAATTCATGCCCCCCAGGCACTTTGAGTTTGGCAGGCATGGATTATGATACAGCAAAGACATCCATTCTCAAGATTCTCCTCATTTTCTTACTCACACTACTAATCATAGTGGTCATAGTGGCCGCAATCGTGATAGCGCGCTTGAGGTCAAACCAAGCCTGCTCCCACCACGATTCTTCTGTCACAATGTTTCAAAGCCAAGCCTCCAACAGATACGCGCCTCCTGCGTTTGTGAAAACCAAGAGCATAGCAGAACACGAGCAGCAACAAGTCATGGGGGATCAGAGCGGCTCCCAACCCCAAGTACAATATTCCAAGAAAGGGGAAACAGGCAGGTTGACATTTTTGTTGCCTGAGCGGAGGAAGTTTGATCTACAAGACTTGTTAAAGGCATCTGCGGAAATTCTAGGGAGTGCCTCCTTTGGCTCTTCCTATAAAGCCGTGATGAGGGACAACCAAGCTGTGGTAGTGAAGAGGTACAAGCACATGAACAATGTGCCTAGAGATGAGTTCTGTGAGCACATGACAAGGCTTGCCTCTCTCTCCCATCCTAATCTTCTTCCTCCTGTTGCCTATTATTATCGCAAGGAAGAAAAGCTCATCCTCTCTGACTTTGTTAACAAGGGTTGCCTCGCCAGCAGTCTCCATGGTAATCACAACTATGAGAAACCGTGCCTTGATTGGCCAACTAGATTGAAAATCGTGAAAGGAATAGCCAAGGGTCTATCATATCTATACAATGCATTGCCCAGCCTGGTAGTGCCTCACGGTCATCTGAAATCTTCAAATGTCCTATTGGATGAATCGTATGAGCCCCTTCTGACGGATTATGCCCTGATTCCAGTGATCAACCTGGACCATGCACAACAAATCATGATGCCTTACAAGTCTCCTGAGTATGCACAACTTGGGCGCATTACTAAGAAAACTGATGTGTGGAGCCTTGGCATTGTTATACTGGAGATCTTAACCGGAAAATTCCCAGAGAACTATCTCACTCTCAGGCATGATACCAATTCAGACATTGCCAGCTGGGTCAACACCATGATCACCGAGAAGCGCACTGGTGAAGTCTTCGATGTCGACATGGGAGGAGTTGAGAATAGTAAAAGCGAATTGCTCAAACTTCTCAAGATTGGCCTCAGTTGTTGCGAGGAGAACGTAGAAAGGAGATTGGACATCAAGGAAGCTCTAGACCAAATTCAACAACTCAAGGATTCTGAGAGTGATGCAGATTATTCTTTAACTATTACTAGCGAACCAGATGGTTTTAGAGCCATATGA 2007 0.4723 MGAHAALPVRVPAALFFLILFSSLLPISFCGLSDDANALLKFKHALQIGDSDPLSSWEPHINNKPPCFGDAANWVGIFCFNNTVWGFRLENMGLQGNIDIPSLASMPHLRSISFMNNSFSGPFPNFNLLRNLKSLYLSFNHFSGPLPDDAFKSMNMLKKVYLSDNEFTGHIPSSLASLPNLLILRLDANKFYGSIPDFRSPSLKKVNFSNNDFEGPIPTNLTTFNTSSFEGNKRLCGAPLPNSCPPGTLSLAGMDYDTAKTSILKILLIFLLTLLIIVVIVAAIVIARLRSNQACSHHDSSVTMFQSQASNRYAPPAFVKTKSIAEHEQQQVMGDQSGSQPQVQYSKKGETGRLTFLLPERRKFDLQDLLKASAEILGSASFGSSYKAVMRDNQAVVVKRYKHMNNVPRDEFCEHMTRLASLSHPNLLPPVAYYYRKEEKLILSDFVNKGCLASSLHGNHNYEKPCLDWPTRLKIVKGIAKGLSYLYNALPSLVVPHGHLKSSNVLLDESYEPLLTDYALIPVINLDHAQQIMMPYKSPEYAQLGRITKKTDVWSLGIVILEILTGKFPENYLTLRHDTNSDIASWVNTMITEKRTGEVFDVDMGGVENSKSELLKLLKIGLSCCEENVERRLDIKEALDQIQQLKDSESDADYSLTITSEPDGFRAI 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0014 668 Pfam Leucine rich repeat 130 191 IPR001611 GO:0005515
Sto1g0014 668 Gene3D Transferase(Phosphotransferase) domain 1 447 661 - -
Sto1g0014 668 Gene3D Ribonuclease Inhibitor 32 199 IPR032675 -
Sto1g0014 668 Pfam Protein kinase domain 375 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0014 668 Gene3D Phosphorylase Kinase; domain 1 338 446 - -
Sto1g0014 668 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 12 653 - -
Sto1g0014 668 Gene3D Ribonuclease Inhibitor 200 247 IPR032675 -
Sto1g0014 668 ProSiteProfiles Protein kinase domain profile. 371 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g0014 668 Pfam Leucine rich repeat N-terminal domain 33 79 IPR013210 -
Sto1g0014 668 SUPERFAMILY Protein kinase-like (PK-like) 375 645 IPR011009 -
Sto1g0014 668 SUPERFAMILY L domain-like 33 240 - -
Sto1g0014 668 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0014 Sto-Chr1 106014 108131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0014 31 664 Receptor kinase-like Gene Family AT5G35390 48.589 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto1g0014 Pkinase 2.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0014 - - gmx:100801053 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0014 1 106014 108131 Sto1g0014 1 106014 108131 ECH