Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0001 ATGAAACTGCAGACACACATTCCGGGGCAGTTGTCAGGTCAGGTACCTAATCAAGCAGCGTCCCATTTGCCCGGACTGTCTCAGCCAAATGGAAATGCTCCCCCTCCTCAGATACCAAACTTAGGTGGTGTTCCACGCCCGACCATAAATATGGACCCCGAATTTCTCAGAGCACGCTCGTTTATGCAAGAGAAGATCTATGATATATTATTGTCCCGGCAGCAGCAGCCTGTTCCAGAACATAATAGAAGAAAGTTTAAGGATCTTGCTAAACGCTTGGAGGAAGGCATGCTAAAAGCTGCGCTCTCTAAGGAGGAGTACATGAACTTGGACACATTAGAGAGCCGGTTGTTTAATTGCATCAAACGATCATCTATGAATAATCACAGCCAACAATATCCACAGCAATTTAGCTCTTCTCCAATTGGTACAATGATACCAACACCTGGTATGTCACATGTTGTGAATTCTAGCATGGCAGTTGCATCTTCTGTAGATACCTCGATGATTGCTGCCACTGGATGTAATAGCATAGCATCTACATCTGTCAATAGTGGAAGCATGTTTGCAACCGGTGGCTTGCATGGCAATTCTTTGAGTAGATCTGATGGATTGTCTAATGGCTATCAGCAGTCTTCTACCAGCTTTTCCATTGGTGCTGGGGGGAACATGTCATCAATGGGTGTGCAGAGAATTGCAAGCCAGATGATTCCCACTCCTGGGTTTACTGGGAGCAACCAATCATACATGAATGTAGAATCTTCTAATAATGGTGGTGTCTTTTCCAGTGTAGAATCTACAATGGTATCACAGTCACAGCAGCAGAAGCAGCACCTTGGTGGCCAAAACAATAATGTATTGCAGAACCTTGGTGGTCAAATGGGTAGTGGAATGAGGTCTGGTTTACAGCAAAAACCTTTTGCATACTCAAATGGATCTATAAGTGGTGGGTTAGGCTTGATTGGAAACAATATGCAATTCATCGATGAATCTGGCACCTCTGATGGTTATGCCGCAAATTATGCTAATTCCTCTAAACACTTGCAGCAGCATTTTGATCAAAATCAGCAACCACCGGTGCAGGGTGATGGATATGGATTGAGTAATGTTGATTCGTTTGCTTCTGGAAACTTCTATACATCGGCAACATCGTCTGGTTCTATGATGAACAGTCAGAACTTGAATTCAATTAAATTGCCTGCAATATCCAAAACCAACTCTCTGATAAGTAGTCGGTCAAATTTGCACGGAATGCAGCAGGCTGCTCATTTAAAGTCTCAAGCAATTAATCAGTTGGAGAAGTTGAATTTTCAGTCTTCCTTGACTTCAAGAGATGGTGTTCTGCATCCTCAACAGCAATATCAGGAACAGCCCCAACAATTTCAACAAACAGAGCAGTATGCTCAGCAGCAATTTCAACTTAAGATGCAAAGTCAGCAGTCTCAGCATTTGATCAATAGTGATGGTTTTAGCGAGTCTCATCTCTCTTCCAATTTAGAAAGCCAAGTGAAGTCTGAGCCTGGAGTTGAACACCATAAAGAAGTGCTGAATTCACAGGTTTCTGAACAGTTTCATATTTCTGAGATGAAAAACCAGTTCCAGCAGAACTCTACTGATGATTGTTCTAGGGGTGCTCAACATCTTTCTTTTCCAACTGGTCAGAATGATTTATACTCAACAACACCACAGAATTCACAACAAATGTTACACCAAAATCAGTTGAAATCAGAGTCTGGAAATAATTTTAGTTGTCTTCCAGTTGGCGTACAATCTAAATCAGCACTTATAAATCAATGGAATACCCAATCacaagatgttaaccacatacCTGGCAGTATGTCACATGAGCAGCATCTCCAGATGGATTTCCATCAGAGAATATCAAGGCAAGATGAAGCCCAATGCAATAATTTATCATCAGATGGATCTATTGTTGGTCAAGCTGTTGCTTCTAGAGGCTCGGCTGAGCCACCAGACTCAAGTAGTGCTATCAAGAAAGCACACAGGAACCAACAGAGGTGGCTTTTATTTCTGCTTCATGCACGACGGTGTCCTGCCCCAGAAGGACGATGCCAAGAGCGAAATTGTTATAGTGCTCAGAAGTTATGTAGACACATAGATGGATGCAACCTGCCTCGCTGTCCATATCCCCGCTGTCATCATACCAGGCTATTGCTAATTCATTTCAGAAACTGCAAGGATCCATGTTGCCCAGTTTGTGTTTCTGTTCGAGATTATCGACGCTCATTTCAAGTTAAGCCTCAGATACGGCCAGGTCCTAATTCAGCTAGGTTGATAACAAAGCCTCTACCTGTGATTGAAACTTCAGAAGACCTGCAGCCATCTCTAAAGCGTATGAAGATTGAGCAGTGTACCCAGTCTGTTAATCCCATAAATGACAATTCTGCTATATCAATTTCTACGAACTCCCATTCTCATTTTTCTGAGAGTGCCCAATGCCAAGACTATCCACATGGTGAGACCTCTATGTCAATTAAATCTGAGCTTACAGAAGTTAAGGCAGAATTTCCGGTGCATATGGTGCGTGAAAATCTTAGTGAAGTTAATGTAAGTAATGCGGAAGACAGAGGACGAGGTGGTGAACCTGTCACATATGATGAGCCTGCTAACATAGCTAGGCCCGAACATATTAAAACTGAGAAAGAAACTGGACAAGATAAGCCAGTAAGTGTGACCCAGCCGTCGGAAAATGCAGCAGGGACAAAGTCTGGTAAGCCCAAAATAAAGGGTGTCTCCATGACTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATCAGTGGCCTAAGACAATGGGTTGGCCAAAGCAAAGCAAAAGCAGAAAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAGTTGTGTGCAGTAGAGAAGCTTACTTTTGAACCACCACCTATTTATTGCTCAACTTGTGGTGCTCGCATTAAACGAAATGCTATGTATTATACCATGGGTGCTGGTGATACACGGCATTATTTTTGTATTCCATGCTATAATGAGGCTCGTGGAGACACCATTATTGTTGATGGAACTCCTATCCCTAAAGCCAGGctggagaaaaagaaaaatgatgaggAAACCGAAGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACATCAAATCTGTGCCTTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAATACACTTGCCCTAACTGTTATATTCAAGAGATAGAAAGAGGAGAGCgtaaacccttaccccaaagTGCTGTTCTTGGGGCCAAGGATTTGCCTAGAACTATTCTCAGTGACCACATAGAGCAGCGGTTGTTTAGACGTCTAAAGCAAGAAAGACAAGAGAGGGCAAGGTTTCAAGGAAAAAGTTACGATGAGGTGCCTGGAGCTGAATCACTTGTTATAAGAGTTGTGTCATCTGTAGACAAGAAGTTGGAAGTGAAACAGCGGTTTTTGGAAATTTTTCAGGAAGAAAATTACCCAACAGAATTTCCTTATAAATCAAAGGTAATTTTATTGTTTCAGAAGATTGAAGGCGTGGAAGTATGCCTGTTTGGCATGTATGTTCAAGAATTTGGATCTGAATGTCAATTCCCTAACCAACGCCGGGTGTATCTTTCATATCTCGATTCTGTCAAGTATTTTAGGCCTGAAGTTAAAGCAGTGACTGGAGAAGCTCTTCGGACATTTGTTTATCATGAAATCCTGATTGGATACCTCGAATATTGTAAGAAACGTGGTTTTACAAGCTGCTATATTTGGGCCTGTCCCCCATTGAAGGGTgaagattatattttatattgtcaTCCAGAAATTCAGAAAACCCCAAAATCCGATAAGCTTCGGGAATGGTACCTATCAATGTTGAGAAAAGCCGCGAAGGAGAATATTGTGGTCGAACTCACCAACTTATATGACCATTTCTTTGTATCTACTGGTGAATGTAGGGCTAAGGTTACTGCAGCAAGACTTCCTTATTTCGATGGTGACTACTGGCCGGGGGCTGCAGAGGATTTGATTTATCAACTTCGCCAAGAAGAAGATGGCCGAAAACATAATAAGAAAGGAACAACTAAAAAAACTATCACAAAAAGGGCTTTAAAGGCATCTGGTCAGTCAGATCTTTCTGGAAATGCCTCAAAAGATCTCCTCCTAATGCATAAACTTGGTGAAACCATAAGCCCAATGAAAGAAGATTTTATCATGGTGCATTTGCAGTATGCATGCAGTCACTGTTGTATTTTAATGGTGTCAGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAAGTGTTACGAAGCAGAACAAAACcgtgaagaaagagagaggcACCCTATTAATCAGAGGGAGAAACATGCCCTTTACCCAAATGAAATTACTGATGTATCAGTTGATACAAAGGACAAAGATGAGATTCTTGAGAGTGAATTTTTTGACACTAGACAGGCATTTTTGAGTCTCTGTCAAGGAAATCATTATCAATATGATACTCTAAGGCGGGCTAAGCATTCCTCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCCTTTGTGACAACTTGTAATATATGCCACCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGATTATGACGTATGCAATGCTTGTTATCAAAAAGATGGAGGTATTGATCATCCTCATAAGTTGACAAATCATCCGTCACTGGCCGATCGTGATGCTCAGAACAAAGAAGCTAGGCAGCTTCGAGTGTTGCAGTTACGGAAAATGCTTGATCTCCTCGTGCACGCATCCCAATGTCGATCTGCACATTGCCAGTATCCAAATTGTCGCAAAGTGAAGGGACTTTTCCGCCATGGGATGCAATGCAAAACACGTGCCTCTGGAGGCTGTGTTCTCTGCAAGAAAATGTGGTATTTACTGCAACTTCATGCTCGTGCTTGCAAAGAATCTGAATGCCACGTACCACGTTGCAGAGATTTAAAAGAACATTTAAGGAGGTTGCAGCAGCAGTCTGACTCTCGGCGAAGAGCAGCTGTGATGGAGATGATGAGACAGAGAGCTGCCGAAGTTGCCAACAATGCAGGATAA 5133 0.415 MKLQTHIPGQLSGQVPNQAASHLPGLSQPNGNAPPPQIPNLGGVPRPTINMDPEFLRARSFMQEKIYDILLSRQQQPVPEHNRRKFKDLAKRLEEGMLKAALSKEEYMNLDTLESRLFNCIKRSSMNNHSQQYPQQFSSSPIGTMIPTPGMSHVVNSSMAVASSVDTSMIAATGCNSIASTSVNSGSMFATGGLHGNSLSRSDGLSNGYQQSSTSFSIGAGGNMSSMGVQRIASQMIPTPGFTGSNQSYMNVESSNNGGVFSSVESTMVSQSQQQKQHLGGQNNNVLQNLGGQMGSGMRSGLQQKPFAYSNGSISGGLGLIGNNMQFIDESGTSDGYAANYANSSKHLQQHFDQNQQPPVQGDGYGLSNVDSFASGNFYTSATSSGSMMNSQNLNSIKLPAISKTNSLISSRSNLHGMQQAAHLKSQAINQLEKLNFQSSLTSRDGVLHPQQQYQEQPQQFQQTEQYAQQQFQLKMQSQQSQHLINSDGFSESHLSSNLESQVKSEPGVEHHKEVLNSQVSEQFHISEMKNQFQQNSTDDCSRGAQHLSFPTGQNDLYSTTPQNSQQMLHQNQLKSESGNNFSCLPVGVQSKSALINQWNTQSQDVNHIPGSMSHEQHLQMDFHQRISRQDEAQCNNLSSDGSIVGQAVASRGSAEPPDSSSAIKKAHRNQQRWLLFLLHARRCPAPEGRCQERNCYSAQKLCRHIDGCNLPRCPYPRCHHTRLLLIHFRNCKDPCCPVCVSVRDYRRSFQVKPQIRPGPNSARLITKPLPVIETSEDLQPSLKRMKIEQCTQSVNPINDNSAISISTNSHSHFSESAQCQDYPHGETSMSIKSELTEVKAEFPVHMVRENLSEVNVSNAEDRGRGGEPVTYDEPANIARPEHIKTEKETGQDKPVSVTQPSENAAGTKSGKPKIKGVSMTELFTPEQVREHISGLRQWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDTIIVDGTPIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEIERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARFQGKSYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKENIVVELTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKHNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQYACSHCCILMVSGNRWVCNQCKNFQICDKCYEAEQNREERERHPINQREKHALYPNEITDVSVDTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGIDHPHKLTNHPSLADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0001 1710 SMART PHD_3 978 1077 IPR001965 -
Sto1g0001 1710 MobiDBLite consensus disorder prediction 1 47 - -
Sto1g0001 1710 SMART zz_5 1531 1577 IPR000433 GO:0008270
Sto1g0001 1710 SMART zz_5 1411 1455 IPR000433 GO:0008270
Sto1g0001 1710 MobiDBLite consensus disorder prediction 1 28 - -
Sto1g0001 1710 CDD PHD_HAC_like 1004 1076 - -
Sto1g0001 1710 ProSitePatterns Zinc finger ZZ-type signature. 1537 1564 IPR000433 GO:0008270
Sto1g0001 1710 SUPERFAMILY RING/U-box 1392 1461 - -
Sto1g0001 1710 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1033 1077 IPR013083 -
Sto1g0001 1710 ProSiteProfiles Zinc finger TAZ-type profile. 1592 1675 IPR000197 -
Sto1g0001 1710 ProSitePatterns Zinc finger PHD-type signature. 1005 1076 IPR019786 -
Sto1g0001 1710 Gene3D - 1531 1582 IPR043145 -
Sto1g0001 1710 PANTHER CBP/P300-RELATED 158 1709 IPR013178 GO:0004402|GO:0006355|GO:0016573
Sto1g0001 1710 SUPERFAMILY RING/U-box 1513 1581 - -
Sto1g0001 1710 MobiDBLite consensus disorder prediction 878 892 - -
Sto1g0001 1710 SUPERFAMILY FYVE/PHD zinc finger 1038 1078 IPR011011 -
Sto1g0001 1710 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1094 1530 IPR031162 GO:0004402
Sto1g0001 1710 SMART KAT11_2 1127 1424 IPR013178 GO:0004402|GO:0006355|GO:0016573
Sto1g0001 1710 Gene3D TAZ domain 660 763 IPR035898 -
Sto1g0001 1710 SMART TAZ_2 665 743 IPR000197 -
Sto1g0001 1710 SMART TAZ_2 1595 1673 IPR000197 -
Sto1g0001 1710 Pfam TAZ zinc finger 1602 1672 IPR000197 -
Sto1g0001 1710 Pfam TAZ zinc finger 672 740 IPR000197 -
Sto1g0001 1710 MobiDBLite consensus disorder prediction 893 907 - -
Sto1g0001 1710 ProSiteProfiles Zinc finger TAZ-type profile. 662 743 IPR000197 -
Sto1g0001 1710 Gene3D TAZ domain 1589 1706 IPR035898 -
Sto1g0001 1710 Gene3D - 972 1032 IPR038547 -
Sto1g0001 1710 SUPERFAMILY TAZ domain 667 747 IPR035898 -
Sto1g0001 1710 Pfam Zinc finger, ZZ type 1534 1573 IPR000433 GO:0008270
Sto1g0001 1710 Pfam PHD-finger 1035 1077 IPR019787 -
Sto1g0001 1710 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 158 1709 - -
Sto1g0001 1710 MobiDBLite consensus disorder prediction 854 914 - -
Sto1g0001 1710 ProSiteProfiles Zinc finger ZZ-type profile. 1412 1475 IPR000433 GO:0008270
Sto1g0001 1710 SUPERFAMILY TAZ domain 1594 1677 IPR035898 -
Sto1g0001 1710 Pfam Histone acetylation protein 1134 1350 IPR013178 GO:0004402|GO:0006355|GO:0016573
Sto1g0001 1710 ProSiteProfiles Zinc finger ZZ-type profile. 1532 1585 IPR000433 GO:0008270
Sto1g0001 1710 Gene3D - 1408 1464 IPR043145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0001 Sto-Chr1 4389 14881 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Sto1g0001 HAT_KAT11 5e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0001 K04498 - gmx:100809207 2774.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0001 1 4389 14881 Sto1g0001 1 4389 14881 ECH