Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g4056 ATGGGAGGGAGGTCTTGTAATTCTAATTCATGCAATAGCGGAGAACAAGAACCAAAACTTGAAAACTTGGTTGGTGGCACAGGTGGACCGGCAGATACGAGGCTCACCTCTGGGATAATAGCTGTAGAAGAGAGGGCCAAACTCGCAAAGGAAGGCAAGGTATATATATCGAGGAGTGGGTTTTCTCGCGGGGCATCCATATATCGAGGAGTAACAAGGCATCACCAACATGGTAGATGGCAAGCTAGGATTGGAAGAGTTGCAGGCAACAAAGATGTGTACTTGGGAAGTTTCAGCAGGAAGAGGCATATGATATTGCAGCTATCAAGTTCCGAGGCCGTCATAAACTTGGACATGAGTAGATACGACGTTAAGAGCATTGTTGAGAGCAGCAGCTTGCCCATTGCTGGGGCTGCCAAGCGTTTGAAAGATGTGGAGCATCAGCATTATTCTAATGCCCAACTCATGATGATCACCATAGCAATAGCATCATATACTGCTTCTGATGCCAGCAGCATCAACAACTTGTATTATATTTCACCTGCAGCACATGGTGCACTCAAACCTATAATTGCATTCCATCAAACTGTTGCACTTGCACCCACATCTACCGATAATCCTCCTACCTAA 630 0.4571 MGGRSCNSNSCNSGEQEPKLENLVGGTGGPADTRLTSGIIAVEERAKLAKEGKVYISRSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDVYLGSFSRKRHMILQLSSSEAVINLDMSRYDVKSIVESSSLPIAGAAKRLKDVEHQHYSNAQLMMITIAIASYTASDASSINNLYYISPAAHGALKPIIAFHQTVALAPTSTDNPPT 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g4056 209 SMART rav1_2 67 124 IPR001471 GO:0003700|GO:0006355
Sto13g4056 209 ProSiteProfiles AP2/ERF domain profile. 67 99 IPR001471 GO:0003700|GO:0006355
Sto13g4056 209 PANTHER BNAC02G44180D PROTEIN 59 156 - -
Sto13g4056 209 SUPERFAMILY DNA-binding domain 66 101 IPR016177 GO:0003677
Sto13g4056 209 MobiDBLite consensus disorder prediction 1 17 - -
Sto13g4056 209 Gene3D AP2/ERF domain 67 117 IPR036955 GO:0003700|GO:0006355
Sto13g4056 209 MobiDBLite consensus disorder prediction 1 29 - -
Sto13g4056 209 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 59 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g4056 Sto-Chr13 41144547 41146031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g4056 42 145 AP2-EREBP Transcription Factor Family AT5G17430 57.895 2.85e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g4056 K09285 - jre:108997245 136.732